RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 LPAR6P43657 344 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 SNU13P55769 128 aaKnown RBP14.5□□□□□ -0.09
LIG1-206ENST00000594067 CLDN17P56750 224 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 RAB32Q13637 225 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 SWI5Q1ZZU3 235 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 LYZL4Q96KX0 146 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 CRB3Q9BUF7 120 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 PCDHGA1Q9Y5H4 931 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 IGLV3-32A0A0A0MS00 114 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 CSTBP04080 98 aaKnown RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 CD5P06127 495 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 SFTA3P0C7M3 94 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 AFF3P51826 1226 aaKnown RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 ACY1Q03154 408 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 KISS1Q15726 138 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 RSPO4Q2I0M5 234 aaPredicted RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 AADACL3Q5VUY0 350 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 EHFQ9NZC4 300 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 C9JQL5 133 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 F5H5K5 113 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 STMND1H3BQB6 276 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 LRP3O75074 770 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 FCGR3AP08637 254 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 SERPINA2P20848 420 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 BLVRBP30043 206 aaPredicted RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 IL15RAQ13261 267 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 HABP2Q14520 560 aaPredicted RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 PEG10Q86TG7 708 aaKnown RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 DTX1Q86Y01 620 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 WDSUB1Q8N9V3 476 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 SSC4DQ8WTU2 575 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 SLC26A1Q9H2B4 701 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 RNF122Q9H9V4 155 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 GSKIPQ9P0R6 139 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 ASCC3Q8N3C0 2202 aaKnown RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 ADAMTS20P59510 1910 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 HOXB5P09067 269 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 FOLR2P14207 255 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 SNRPEP62304 92 aaKnown RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 RBM39Q14498 530 aaKnown RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 RPL7L1Q6DKI1 246 aaKnown RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 CRIP3Q6Q6R5 217 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 LHFPL1Q86WI0 220 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 RASL10BQ96S79 203 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 AKIRIN1Q9H9L7 192 aaPredicted RBP14.49□□□□□ -0.09
LIG1-206ENST00000594067 OSGIN2Q9Y236 505 aa14.49□□□□□ -0.09
LIG1-206ENST00000594067 CFAP54Q96N23 3096 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 GRB2P62993 217 aaKnown RBP14.48□□□□□ -0.09
LIG1-206ENST00000594067 COL19A1Q14993 1142 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 KCNMB1Q16558 191 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 HIST3H3Q16695 136 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 PNLDC1Q8NA58 520 aaKnown RBP14.48□□□□□ -0.09
LIG1-206ENST00000594067 C2orf50Q96LR7 162 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 SPSB2Q99619 263 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 ELL3Q9HB65 397 aaPredicted RBP14.48□□□□□ -0.09
LIG1-206ENST00000594067 ZNF160Q9HCG1 818 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 OR5H15A6NDH6 313 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 AQP7P3A6NL99 342 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 SERPINA5P05154 406 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 HPNP05981 417 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 GLAP06280 429 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 GUSBP11Q6P575 273 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 BTNL8Q6UX41 500 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 SLC22A8Q8TCC7 542 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 SCGB3A2Q96PL1 93 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 DEFB126Q9BYW3 111 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 EGLN1Q9GZT9 426 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 PLA2G2EQ9NZK7 142 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 DNAJB11Q9UBS4 358 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 RARRES3Q9UL19 164 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 B3GALT1Q9Y5Z6 326 aa14.48□□□□□ -0.09
LIG1-206ENST00000594067 FAM157AC9JC47 383 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 MED6O75586 246 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 KNG1P01042 644 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 FAHP16930 419 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 NME2P22392 152 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 S100A10P60903 97 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 SHBQ15464 509 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 UBE2V2Q15819 145 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 PHYHD1Q5SRE7 291 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 ETV3LQ6ZN32 361 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 Q7L0L9 218 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 GALNTL5Q7Z4T8 443 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 FOXRED2Q8IWF2 684 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 FAM89BQ8N5H3 189 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 POC1AQ8NBT0 407 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 SPACA9Q96E40 222 aaPredicted RBP14.47□□□□□ -0.09
LIG1-206ENST00000594067 PHF7Q9BWX1 381 aaPredicted RBP14.47□□□□□ -0.09
LIG1-206ENST00000594067 PECRQ9BY49 303 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 TAF9BQ9HBM6 251 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 ZMAT5Q9UDW3 170 aaKnown RBP14.47□□□□□ -0.09
LIG1-206ENST00000594067 ADAMTS9Q9P2N4 1935 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 IGHV3-15A0A0B4J1V0 119 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 AGPAT2O15120 278 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 RCC1P18754 421 aaPredicted RBP14.47□□□□□ -0.09
LIG1-206ENST00000594067 ECH1Q13011 328 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 DHRS11Q6UWP2 260 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 LRRC18Q8N456 261 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 PIGTQ969N2 578 aa14.47□□□□□ -0.09
LIG1-206ENST00000594067 ZNF701Q9NV72 531 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms