RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ABHD16AO95870 558 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 TCRBP04435 133 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 ATP6V1E1P36543 226 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 ATP5J2P56134 94 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 RPS7P62081 194 aaKnown RBP16.83■□□□□ 0.28
LSM4-203ENST00000593829 GALEQ14376 348 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 MSMPQ1L6U9 139 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 BAIAP2L2Q6UXY1 529 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 MEPCEQ7L2J0 689 aaKnown RBP16.83■□□□□ 0.28
LSM4-203ENST00000593829 OR1J1Q8NGS3 322 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 ABHD4Q8TB40 342 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 ALG8Q9BVK2 526 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 MRPL37Q9BZE1 423 aaKnown RBP16.83■□□□□ 0.28
LSM4-203ENST00000593829 RABL2AQ9UBK7 228 aaPredicted RBP16.83■□□□□ 0.28
LSM4-203ENST00000593829 RABL2BQ9UNT1 228 aa16.83■□□□□ 0.28
LSM4-203ENST00000593829 H7C417 338 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 SC5DO75845 299 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 SULT1A3P0DMM9 295 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 SULT1A4P0DMN0 295 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 SLC2A5P22732 501 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 MMP15P51511 669 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 ERVS71-1P61550 626 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 PITPNAQ00169 270 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 CDONQ4KMG0 1287 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 DCXRQ7Z4W1 244 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 SAMD12Q8N8I0 201 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 NARFLQ9H6Q4 476 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 ISG20L2Q9H9L3 353 aaKnown RBP16.82■□□□□ 0.28
LSM4-203ENST00000593829 PNRC2Q9NPJ4 139 aaKnown RBP16.82■□□□□ 0.28
LSM4-203ENST00000593829 FZR1Q9UM11 496 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 NPTNQ9Y639 398 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 SIRT4Q9Y6E7 314 aaPredicted RBP16.82■□□□□ 0.28
LSM4-203ENST00000593829 NGFP01138 241 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 IFNA7P01567 189 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 DBHP09172 617 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 SELENOVP59797 346 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 TIGD4Q8IY51 512 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 OR6N2Q8NGY6 317 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 LRRC20Q8TCA0 184 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 HAVCR2Q8TDQ0 301 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 ABHD1Q96SE0 405 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 SYT3Q9BQG1 590 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 NUDT15Q9NV35 164 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 DUSP13Q9UII6 198 aa16.82■□□□□ 0.28
LSM4-203ENST00000593829 RPS10-NUDT3A0A1W2PQS6 291 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 CTDSPLO15194 276 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 GSTZ1O43708 216 aaPredicted RBP16.81■□□□□ 0.28
LSM4-203ENST00000593829 MT-ND5P03915 603 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 ZNF250P15622 560 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 BTN2A1Q7KYR7 527 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 DPY19L4Q7Z388 723 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 LRP11Q86VZ4 500 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 SYNPRQ8TBG9 265 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 YIPF5Q969M3 257 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 TEAD3Q99594 435 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 ZCCHC4Q9H5U6 513 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 RTTNQ86VV8 2226 aa16.81■□□□□ 0.28
LSM4-203ENST00000593829 AKAP9Q99996 3911 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 PPP1CBP62140 327 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 DYRK1AQ13627 763 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 GRK1Q15835 563 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 SHEQ5VZ18 495 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 SPNS3Q6ZMD2 512 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 SLC51BQ86UW2 128 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 OR11H4Q8NGC9 324 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 OR51G2Q8NGK0 314 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 OR10S1Q8NGN2 331 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 TRMT10AQ8TBZ6 339 aaKnown RBP16.8■□□□□ 0.28
LSM4-203ENST00000593829 CMTM3Q96MX0 182 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 ABRACLQ9P1F3 81 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 SCP2D1Q9UJQ7 156 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 ZNF222Q9UK12 451 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 TRAV1-2A0A0B4J238 106 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 TSC22D2O75157 780 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 SNAPC5O75971 98 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 PPOXP50336 477 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 KLF3P57682 345 aaPredicted RBP16.8■□□□□ 0.28
LSM4-203ENST00000593829 BAMBIQ13145 260 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 EIF2B1Q14232 305 aaKnown RBP16.8■□□□□ 0.28
LSM4-203ENST00000593829 RSPO1Q2MKA7 263 aaPredicted RBP16.8■□□□□ 0.28
LSM4-203ENST00000593829 KRTAP27-1Q3LI81 207 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 ZNF718Q3SXZ3 478 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 Q5PR19 223 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 SPATA46Q5T0L3 261 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 PRSS57Q6UWY2 283 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 SLC25A40Q8TBP6 338 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 ST7LQ8TDW4 575 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 SLAMF6Q96DU3 332 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 MARS2Q96GW9 593 aaKnown RBP16.8■□□□□ 0.28
LSM4-203ENST00000593829 OR2J1Q9GZK6 312 aa16.8■□□□□ 0.28
LSM4-203ENST00000593829 BARX1Q9HBU1 254 aaPredicted RBP16.8■□□□□ 0.28
LSM4-203ENST00000593829 USF3Q68DE3 2245 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 F5H5K5 113 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 SELENOFO60613 162 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 IGHV4-39P01824 125 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 TUBG1P23258 451 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 GCH1P30793 250 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 TOMM5Q8N4H5 51 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 DYNLRB1Q9NP97 96 aa16.79■□□□□ 0.28
LSM4-203ENST00000593829 TUBG2Q9NRH3 451 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms