RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CRYAAP02489 173 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 HCKP08631 526 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 SELEP16581 610 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 PTAFRP25105 342 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 PTBP1P26599 531 aaKnown RBP eCLIP11.55□□□□□ -0.56
VMP1-217ENST00000593168 CD40LGP29965 261 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 CALCRP30988 508 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 ART1P52961 327 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 PPP5CP53041 499 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 CLDN12P56749 244 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 UBASH3BQ8TF42 649 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 PIGCQ92535 297 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 BORCS5Q969J3 196 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 FAM3DQ96BQ1 224 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 HAVCR1Q96D42 359 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 CMBLQ96DG6 245 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 CPNE2Q96FN4 548 aaPredicted RBP11.55□□□□□ -0.56
VMP1-217ENST00000593168 MARS2Q96GW9 593 aaKnown RBP11.55□□□□□ -0.56
VMP1-217ENST00000593168 SOSTQ9BQB4 213 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 OR2J1Q9GZK6 312 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 OR51B6Q9H340 312 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 HEATR1Q9H583 2144 aaKnown RBP11.55□□□□□ -0.56
VMP1-217ENST00000593168 CNTD2Q9H8S5 307 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 NGBQ9NPG2 151 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 KCNJ16Q9NPI9 418 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 GPR173Q9NS66 373 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 CYSLTR2Q9NS75 346 aa11.55□□□□□ -0.56
VMP1-217ENST00000593168 LOC100289279A0A1B0GTE1 492 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 FABP12A6NFH5 140 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 FAM90A27PA6NNH2 459 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 ANKRD30BLA7E2S9 258 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 THBDP07204 575 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 ELK1P19419 428 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 CD40P25942 277 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 FUT6P51993 359 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 PRSS12P56730 875 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 P2RY14Q15391 338 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 KISS1Q15726 138 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 C2orf76Q3KRA6 126 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 ZNF718Q3SXZ3 478 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 UBE2NLQ5JXB2 153 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 CNIH2Q6PI25 160 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 MOB3CQ70IA8 216 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 PNLDC1Q8NA58 520 aaKnown RBP11.54□□□□□ -0.56
VMP1-217ENST00000593168 OR4D6Q8NGJ1 314 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 CA5BP1Q8WTZ4 195 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 PTX4Q96A99 478 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 TMUB1Q9BVT8 246 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 ABCG5Q9H222 651 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 SLC7A11Q9UPY5 501 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 MPC1Q9Y5U8 109 aa11.54□□□□□ -0.56
VMP1-217ENST00000593168 ZNF850A8MQ14 1090 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 IQCF6A8MYZ5 107 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 FAM25AB3EWG3 89 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 FAM25CB3EWG5 89 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 FAM25GB3EWG6 89 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 LDLRAD4O15165 306 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 BPNT1O95861 308 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 EIF4EP06730 217 aaKnown RBP11.53□□□□□ -0.56
VMP1-217ENST00000593168 CD99P14209 185 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 ARSBP15848 533 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 IGFBP2P18065 325 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 GLRXP35754 106 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 TALDO1P37837 337 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 ALDH3B1P43353 468 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 POU3F4P49335 361 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 RBP2P50120 134 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 ERVS71-1P61550 626 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 SORDQ00796 357 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 DCTN2Q13561 401 aaKnown RBP11.53□□□□□ -0.56
VMP1-217ENST00000593168 SPATA46Q5T0L3 261 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 MBNL2Q5VZF2 373 aaKnown RBP11.53□□□□□ -0.56
VMP1-217ENST00000593168 OR2T2Q6IF00 324 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 ALKBH2Q6NS38 261 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 CRIP3Q6Q6R5 217 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 TMEM108Q6UXF1 575 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 LHFPL2Q6ZUX7 228 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 ANGPTL5Q86XS5 388 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 OR51D1Q8NGF3 324 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 KLF14Q8TD94 323 aaPredicted RBP11.53□□□□□ -0.56
VMP1-217ENST00000593168 RAB40AQ8WXH6 277 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 WFIKKN1Q96NZ8 548 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 GPER1Q99527 375 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 PAPOLGQ9BWT3 736 aaKnown RBP11.53□□□□□ -0.56
VMP1-217ENST00000593168 PALMDQ9NP74 551 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 NPDC1Q9NQX5 325 aaPredicted RBP11.53□□□□□ -0.56
VMP1-217ENST00000593168 MRPL15Q9P015 296 aaKnown RBP11.53□□□□□ -0.56
VMP1-217ENST00000593168 RABL2AQ9UBK7 228 aaPredicted RBP11.53□□□□□ -0.56
VMP1-217ENST00000593168 EXTL2Q9UBQ6 330 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 GHRLQ9UBU3 117 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 FBLN5Q9UBX5 448 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 RABL2BQ9UNT1 228 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 V9GYH0 126 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 VPS13CQ709C8 3753 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 NAV3Q8IVL0 2385 aa11.53□□□□□ -0.56
VMP1-217ENST00000593168 NKX2-6A6NCS4 301 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 J3QRK9 145 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 UBBP0CG47 229 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 NAT2P11245 290 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 KITLGP21583 273 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms