RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ACTA1P68133 377 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 SRSF2Q01130 221 aaKnown RBP9.62□□□□□ -0.87
VMP1-211ENST00000591315 DOC2BQ14184 412 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 GALEQ14376 348 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 CHRFAM7AQ494W8 412 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 TTC23Q5W5X9 447 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 PLCXD3Q63HM9 321 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 FAHD2BQ6P2I3 314 aaPredicted RBP9.62□□□□□ -0.87
VMP1-211ENST00000591315 Q6ZSR3 168 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 KRT74Q7RTS7 529 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 FAM220AQ7Z4H9 259 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 THAP5Q7Z6K1 395 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 FAM90A1Q86YD7 464 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 KLHL36Q8N4N3 616 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 SCCPDHQ8NBX0 429 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 ERGIC1Q969X5 290 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 FAHD2AQ96GK7 314 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 RTL8AQ9BWD3 113 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 SHARPINQ9H0F6 387 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 TLNRD1Q9H1K6 362 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 MOB1AQ9H8S9 216 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 FGF20Q9NP95 211 aaPredicted RBP9.62□□□□□ -0.87
VMP1-211ENST00000591315 ERVK13-1Q9NX77 482 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 CTSZQ9UBR2 303 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 CLEC2DQ9UHP7 191 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 ENPP5Q9UJA9 477 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 ZNF391Q9UJN7 358 aa9.62□□□□□ -0.87
VMP1-211ENST00000591315 RPL36Q9Y3U8 105 aaKnown RBP9.62□□□□□ -0.87
VMP1-211ENST00000591315 TRAV20A0A0B4J274 112 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 A0A1B0GVI7 797 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 LOC107986453A0A1B0GWG9 222 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 SNTNA6NMZ2 147 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 OR4C45A6NMZ5 311 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 AKR7A2O43488 359 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 SYT7O43581 403 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 XPNPEP2O43895 674 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 FADS2O95864 444 aaKnown RBP9.61□□□□□ -0.87
VMP1-211ENST00000591315 NRASP01111 189 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 ATP6V1B1P15313 513 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 ADRA2CP18825 462 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 AMY2BP19961 511 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 GTF2A1P52655 376 aaPredicted RBP9.61□□□□□ -0.87
VMP1-211ENST00000591315 RAB40BQ12829 278 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 CEACAM21Q3KPI0 293 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 FAM76BQ5HYJ3 339 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 OR2G6Q5TZ20 316 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 TMEM42Q69YG0 159 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 XAF1Q6GPH4 301 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 DOK3Q7L591 496 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 C1orf87Q8N0U7 546 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 BATF2Q8N1L9 274 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 OR5T2Q8NGG2 359 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 OR51A4Q8NGJ6 313 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 NPRL2Q8WTW4 380 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 TFAP2CQ92754 450 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 GGHQ92820 318 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 ADAT3Q96EY9 351 aaPredicted RBP9.61□□□□□ -0.87
VMP1-211ENST00000591315 ZNF488Q96MN9 340 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 TMPRSS13Q9BYE2 586 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 OR51I2Q9H344 312 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 C8orf4Q9NR00 106 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 SNTG1Q9NSN8 517 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 TMEM160Q9NX00 188 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 CDC42EP3Q9UKI2 254 aa9.61□□□□□ -0.87
VMP1-211ENST00000591315 LOC105371242A0A075B767 164 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 OOEPA6NGQ2 149 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 H0YAE9 185 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 SYNGR1O43759 233 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 HTR1AP08908 422 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 SELLP14151 372 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 MZT1Q08AG7 82 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 ALKBH1Q13686 389 aaKnown RBP9.6□□□□□ -0.87
VMP1-211ENST00000591315 UBE2V2Q15819 145 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 CLVS2Q5SYC1 327 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 FDX2Q6P4F2 183 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 HAGHLQ6PII5 290 aaPredicted RBP9.6□□□□□ -0.87
VMP1-211ENST00000591315 RNF144BQ7Z419 303 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 ANGPTL5Q86XS5 388 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 MUC20Q8N307 709 aaPredicted RBP9.6□□□□□ -0.87
VMP1-211ENST00000591315 FTMTQ8N4E7 242 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 TRMT10AQ8TBZ6 339 aaKnown RBP9.6□□□□□ -0.87
VMP1-211ENST00000591315 SGCDQ92629 289 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 NEIL1Q96FI4 390 aaPredicted RBP9.6□□□□□ -0.87
VMP1-211ENST00000591315 HIST1H2AAQ96QV6 131 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 CCL13Q99616 98 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 SMURF1Q9HCE7 757 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 ERVK-18Q9QC07 812 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 OPN4Q9UHM6 478 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 PCDHGB1Q9Y5G3 927 aa9.6□□□□□ -0.87
VMP1-211ENST00000591315 SIRT4Q9Y6E7 314 aaPredicted RBP9.6□□□□□ -0.87
VMP1-211ENST00000591315 IGKV1-27A0A075B6S5 117 aa9.59□□□□□ -0.87
VMP1-211ENST00000591315 TMEM210A6NLX4 147 aa9.59□□□□□ -0.87
VMP1-211ENST00000591315 C22orf46C9J442 243 aa9.59□□□□□ -0.87
VMP1-211ENST00000591315 ADAM20O43506 726 aa9.59□□□□□ -0.87
VMP1-211ENST00000591315 MTRF1O75570 445 aaKnown RBP9.59□□□□□ -0.87
VMP1-211ENST00000591315 FOXH1O75593 365 aa9.59□□□□□ -0.87
VMP1-211ENST00000591315 LALBAP00709 142 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms