RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 Q9H521 79 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 GPR173Q9NS66 373 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 PCDHB10Q9UN67 800 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 PPIAL4EA0A075B759 164 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 TRBV2A0A0J9YWF9 115 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 OR5B21A6NL26 309 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF732B4DXR9 585 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 PTGES3LE9PB15 166 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 PPIAL4DF5H284 164 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 SERPINA3P01011 423 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 PPIAL4FP0DN26 164 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 C21orf33P30042 268 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-212ENST00000590096 GTF2A1P52655 376 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-212ENST00000590096 GNG3P63215 75 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 KRTAP1-1Q07627 177 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 ZMYND11Q15326 602 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 TMEM155Q4W5P6 130 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 TMEM42Q69YG0 159 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF826PQ6ZT77 177 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 Q71RC1 249 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-212ENST00000590096 LRRC28Q86X40 367 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-212ENST00000590096 GATAD2BQ8WXI9 593 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF665Q9H7R5 613 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 TRIM36Q9NQ86 728 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 BABAM2Q9NXR7 383 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 PPIAL4AQ9Y536 164 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 TLN2Q9Y4G6 2542 aa17.91■□□□□ 0.46
ATG4D-212ENST00000590096 ANKRD61A6NGH8 418 aa17.9■□□□□ 0.46
ATG4D-212ENST00000590096 GATBO75879 557 aaKnown RBP17.9■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF205O95201 554 aa17.9■□□□□ 0.46
ATG4D-212ENST00000590096 CDK1P06493 297 aa17.9■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF16P17020 682 aaPredicted RBP17.9■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF20P17024 532 aa17.9■□□□□ 0.46
ATG4D-212ENST00000590096 BOLLQ8N9W6 283 aaKnown RBP17.9■□□□□ 0.46
ATG4D-212ENST00000590096 OR13C3Q8NGS6 347 aa17.9■□□□□ 0.46
ATG4D-212ENST00000590096 TLNRD1Q9H1K6 362 aa17.9■□□□□ 0.46
ATG4D-212ENST00000590096 ERGIC3Q9Y282 383 aa17.9■□□□□ 0.46
ATG4D-212ENST00000590096 CDIPTO14735 213 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 LMX1BO60663 402 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 ZFPL1O95159 310 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 IGHV2-5P01817 119 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 LMO4P61968 165 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 CDK5R1Q15078 307 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 FAM76BQ5HYJ3 339 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 DMRTC1Q5HYR2 192 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 FAM201AQ5SY85 155 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 C11orf53Q8IXP5 236 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 LINC01356Q8N9X3 169 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 SCCPDHQ8NBX0 429 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 LRRC29Q8WV35 223 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 PP6455Q8WZ26 134 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 RPL3LQ92901 407 aaKnown RBP17.89■□□□□ 0.45
ATG4D-212ENST00000590096 MSI2Q96DH6 328 aaKnown RBP17.89■□□□□ 0.45
ATG4D-212ENST00000590096 TECTBQ96PL2 329 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 PDCD1LG2Q9BQ51 273 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 CHST5Q9GZS9 411 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 FGF23Q9GZV9 251 aaPredicted RBP17.89■□□□□ 0.45
ATG4D-212ENST00000590096 SLC7A11Q9UPY5 501 aa17.89■□□□□ 0.45
ATG4D-212ENST00000590096 FSTL3O95633 263 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 WNT4P56705 351 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 TAS2R43P59537 309 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 XAF1Q6GPH4 301 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 WDR82Q6UXN9 313 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 OR10AC1Q8NH08 325 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 TSEN15Q8WW01 171 aaKnown RBP17.88■□□□□ 0.45
ATG4D-212ENST00000590096 FGGYQ96C11 551 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 C1orf159Q96HA4 380 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 MND1Q9BWT6 205 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 TMEM165Q9HC07 324 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 YAE1D1Q9NRH1 226 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 ERVK-18Q9QC07 812 aa17.88■□□□□ 0.45
ATG4D-212ENST00000590096 B4DSR2 109 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 CD80P33681 288 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 SLC35A2P78381 396 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 CNN3Q15417 329 aaKnown RBP17.87■□□□□ 0.45
ATG4D-212ENST00000590096 KCNJ8Q15842 424 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 RBM48Q5RL73 367 aaKnown RBP17.87■□□□□ 0.45
ATG4D-212ENST00000590096 RNLSQ5VYX0 342 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 FAM166AQ6J272 317 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 GCSAMQ8N6F7 178 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 NANOGP1Q8N7R0 232 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 OR51A4Q8NGJ6 313 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 OR10Z1Q8NGY1 313 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 ADAT3Q96EY9 351 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-212ENST00000590096 OR51I2Q9H344 312 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 METTL17Q9H7H0 456 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-212ENST00000590096 BLOC1S6Q9UL45 172 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 DHDHQ9UQ10 334 aa17.87■□□□□ 0.45
ATG4D-212ENST00000590096 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.86■□□□□ 0.459e-7■■■□□ 19.2
ATG4D-212ENST00000590096 ABCA2Q9BZC7 2435 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 TRAV38-1A0A0B4J264 116 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 FAM157AC9JC47 383 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 C3orf80F5H4A9 247 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 LGALS8O00214 317 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 OGG1O15527 345 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 TGFAP01135 160 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 KRTAP21-3Q3LHN1 58 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 ZNF404Q494X3 552 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 SFRP4Q6FHJ7 346 aaPredicted RBP17.86■□□□□ 0.45
ATG4D-212ENST00000590096 ZNF573Q86YE8 665 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms