RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	HIST2H3A	Q71DI3	136 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	TMEM185A	Q8NFB2	350 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	THAP6	Q8TBB0	222 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	SLC25A18	Q9H1K4	315 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	RNF122	Q9H9V4	155 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	BCO1	Q9HAY6	547 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	TAS2R8	Q9NYW2	309 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	OR52A1	Q9UKL2	312 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	GLA	P06280	429 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	ZNF84	P51523	738 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	ECH1	Q13011	328 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	SNTB1	Q13884	538 aa	Known RBP	13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	LINC00303	Q3SY05	128 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	PAN3	Q58A45	887 aa	Known RBP	13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	ASPHD2	Q6ICH7	369 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	SLC36A1	Q7Z2H8	476 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	SERPINA12	Q8IW75	414 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	TUSC5	Q8IXB3	177 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	KCNRG	Q8N5I3	272 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	CPT1C	Q8TCG5	803 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	TMEM106A	Q96A25	262 aa		13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	AK6	Q9Y3D8	172 aa	Known RBP	13.49	□□□□□ -0.25
DDX39A-209	ENST00000589318	BOD1L1	Q8NFC6	3051 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	ARHGAP21	Q5T5U3	1957 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	TRAV8-7	A0A075B6U6	113 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	UBE2C	O00762	179 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	DOK2	O60496	412 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	ISG15	P05161	165 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	ADRA2C	P18825	462 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	ANOS1	P23352	680 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318		Q3ZCU0	254 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	FAM27B	Q5VT28	67 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	STAC2	Q6ZMT1	411 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	PRSS45	Q7RTY3	260 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	CMTM4	Q8IZR5	234 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	GPR137C	Q8N3F9	429 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	LILRB2	Q8N423	598 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	OR52I2	Q8NH67	350 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	FBXO17	Q96EF6	278 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	S100A16	Q96FQ6	103 aa	Known RBP	13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	EXO5	Q9H790	373 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	SEBOX	Q9HB31	216 aa	Predicted RBP	13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	GPR35	Q9HC97	309 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	TMEM38B	Q9NVV0	291 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	ACACA	Q13085	2346 aa		13.48	□□□□□ -0.25
DDX39A-209	ENST00000589318	RTTN	Q86VV8	2226 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	ZNF724	A8MTY0	619 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	BCL2L11	O43521	198 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	TTR	P02766	147 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	ZNF35	P13682	527 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	ANXA7	P20073	488 aa	Known RBP	13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	GUCA1A	P43080	201 aa	Predicted RBP	13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	TSPO2	Q5TGU0	170 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	LPCAT3	Q6P1A2	487 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	LRRTM1	Q86UE6	522 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	MED12L	Q86YW9	2145 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	LRRC18	Q8N456	261 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	ZADH2	Q8N4Q0	377 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	ASB5	Q8WWX0	329 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	ALX4	Q9H161	411 aa	Predicted RBP	13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	TCF7L1	Q9HCS4	588 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	CLEC4A	Q9UMR7	237 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	MSRB2	Q9Y3D2	182 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	DLL1	O00548	723 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	CRYBA1	P05813	215 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	SDHB	P21912	280 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	H2BFS	P57053	126 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	CXADR	P78310	365 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	CEACAM16	Q2WEN9	425 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	LGALS14	Q8TCE9	139 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	TAAR6	Q96RI8	345 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	SEC11C	Q9BY50	192 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	LINC00470	Q9BZP3	86 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	SLCO5A1	Q9H2Y9	848 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	SLC7A10	Q9NS82	523 aa		13.47	□□□□□ -0.25
DDX39A-209	ENST00000589318	LOC107986453	A0A1B0GWG9	222 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318		K7EM74	188 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	GPR31	O00270	319 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	MRPL33	O75394	65 aa	Known RBP	13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	FBP1	P09467	338 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	SLC25A4	P12235	298 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	PRF1	P14222	555 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	ACHE	P22303	614 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	CTSS	P25774	331 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	RNPS1	Q15287	305 aa	Known RBP	13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	KLHL24	Q6TFL4	600 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	DNM1P46	Q6ZS02	220 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	ADGRE4P	Q86SQ3	457 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	SPACA3	Q8IXA5	215 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	RELL2	Q8NC24	303 aa	Predicted RBP	13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	GJC3	Q8NFK1	279 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	CCDC107	Q8WV48	283 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	TSEN15	Q8WW01	171 aa	Known RBP	13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	FOXB1	Q99853	325 aa		13.46	□□□□□ -0.25
DDX39A-209	ENST00000589318	PRRG4	Q9BZD6	226 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms