RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 APOA1P02647 267 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 GLRXP35754 106 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 TALDO1P37837 337 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 POU3F4P49335 361 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 EVX1P49640 407 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 RBP2P50120 134 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 BSPH1Q075Z2 132 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 SNTB1Q13884 538 aaKnown RBP19.08■□□□□ 0.65
ATG4D-209ENST00000588857 MBNL2Q5VZF2 373 aaKnown RBP19.08■□□□□ 0.65
ATG4D-209ENST00000588857 CNIH2Q6PI25 160 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 ANGPTL5Q86XS5 388 aa19.08■□□□□ 0.65
ATG4D-209ENST00000588857 ITLN2Q8WWU7 325 aaPredicted RBP19.08■□□□□ 0.65
ATG4D-209ENST00000588857 ESRP2Q9H6T0 727 aaKnown RBP19.08■□□□□ 0.65
ATG4D-209ENST00000588857 USP9YO00507 2555 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-209ENST00000588857 SPTBN1Q01082 2364 aaKnown RBP19.07■□□□□ 0.64
ATG4D-209ENST00000588857 IQCF6A8MYZ5 107 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 EIF4EP06730 217 aaKnown RBP19.07■□□□□ 0.64
ATG4D-209ENST00000588857 ATP1B3P54709 279 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 NKX6-1P78426 367 aaPredicted RBP19.07■□□□□ 0.64
ATG4D-209ENST00000588857 CEACAM21Q3KPI0 293 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 AWAT2Q6E213 333 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 RNF144BQ7Z419 303 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 LINC01560Q8TB33 94 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 RFT1Q96AA3 541 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 CRIM1Q9NZV1 1036 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 PURGQ9UJV8 347 aaKnown RBP19.07■□□□□ 0.64
ATG4D-209ENST00000588857 FZR1Q9UM11 496 aa19.07■□□□□ 0.64
ATG4D-209ENST00000588857 MRPS28Q9Y2Q9 187 aaKnown RBP19.07■□□□□ 0.64
ATG4D-209ENST00000588857 SETXQ7Z333 2677 aaKnown RBP19.06■□□□□ 0.64
ATG4D-209ENST00000588857 FABP12A6NFH5 140 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 TUBAL3A6NHL2 446 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 TIMM8AO60220 97 aaPredicted RBP19.06■□□□□ 0.64
ATG4D-209ENST00000588857 LILRA1O75019 489 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 CA6P23280 308 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 OR3A4PP47883 348 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 ART1P52961 327 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 TFF3Q07654 80 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 SLC22A25Q6T423 547 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 SYNPRQ8TBG9 265 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 CYSLTR2Q9NS75 346 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 ADGRG4Q8IZF6 3080 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 ANKHD1Q8IWZ3 2542 aaKnown RBP19.06■□□□□ 0.64
ATG4D-209ENST00000588857 BPNT1O95861 308 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 KITLGP21583 273 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 PTGFRP43088 359 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 VHLLQ6RSH7 139 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 FAM131AQ6UXB0 335 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 NUP37Q8NFH4 326 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 OR5D18Q8NGL1 313 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 TNFAIP8L1Q8WVP5 186 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 S100A13Q99584 98 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 EXTL2Q9UBQ6 330 aa19.06■□□□□ 0.64
ATG4D-209ENST00000588857 PLCE1Q9P212 2302 aa19.05■□□□□ 0.64
ATG4D-209ENST00000588857 ALKBH6Q3KRA9 238 aa19.05■□□□□ 0.64
ATG4D-209ENST00000588857 GLIPR1L1Q6UWM5 242 aa19.05■□□□□ 0.64
ATG4D-209ENST00000588857 OR5A2Q8NGI9 324 aa19.05■□□□□ 0.64
ATG4D-209ENST00000588857 OR5P3Q8WZ94 311 aa19.05■□□□□ 0.64
ATG4D-209ENST00000588857 TMEM100Q9NV29 134 aa19.05■□□□□ 0.64
ATG4D-209ENST00000588857 RHBDL2Q9NX52 303 aa19.05■□□□□ 0.64
ATG4D-209ENST00000588857 DUSP13Q9UII6 198 aa19.05■□□□□ 0.64
ATG4D-209ENST00000588857 SPTAN1Q13813 2472 aaKnown RBP19.04■□□□□ 0.64
ATG4D-209ENST00000588857 TMEM272A0A1B0GTI8 110 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 UBBP0CG47 229 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 TMEM225BP0DP42 221 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 ZNF250P15622 560 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 METAP1DQ6UB28 335 aaPredicted RBP19.04■□□□□ 0.64
ATG4D-209ENST00000588857 OR8G5Q8NG78 346 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 OR8S1Q8NH09 359 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 TMEM171Q8WVE6 324 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 RAB40AQ8WXH6 277 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 DVL3Q92997 716 aaPredicted RBP19.04■□□□□ 0.64
ATG4D-209ENST00000588857 ITPKCQ96DU7 683 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 SLC25A38Q96DW6 304 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 S100A16Q96FQ6 103 aaKnown RBP19.04■□□□□ 0.64
ATG4D-209ENST00000588857 RNF170Q96K19 258 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 KCNK15Q9H427 330 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 ING4Q9UNL4 249 aa19.04■□□□□ 0.64
ATG4D-209ENST00000588857 NOP16Q9Y3C1 178 aaKnown RBP19.04■□□□□ 0.64
ATG4D-209ENST00000588857 IGKV1-27A0A075B6S5 117 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 PQLC2LA1A4F0 135 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 J3QRK9 145 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 MMP15P51511 669 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 GPM6AP51674 278 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 PPP5CP53041 499 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 KLF3P57682 345 aaPredicted RBP19.03■□□□□ 0.64
ATG4D-209ENST00000588857 SELENOVP59797 346 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 NCMAPQ5T1S8 102 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 CRIP3Q6Q6R5 217 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 CMTM4Q8IZR5 234 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 OR4M1Q8NGD0 313 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 HPSE2Q8WWQ2 592 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 BORCS5Q969J3 196 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 PLPPR2Q96GM1 343 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 ABCG5Q9H222 651 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 MYEF2Q9P2K5 600 aaKnown RBP19.03■□□□□ 0.64
ATG4D-209ENST00000588857 GHRLQ9UBU3 117 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 POU2F3Q9UKI9 436 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 ATP23Q9Y6H3 246 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 V9GYH0 126 aa19.03■□□□□ 0.64
ATG4D-209ENST00000588857 DOPEY1Q5JWR5 2465 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms