RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 VAMP5O95183 116 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 FADS6Q8N9I5 356 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 FNDC9Q8TBE3 224 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 HAS2Q92819 552 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 INTS12Q96CB8 462 aaKnown RBP16.34■□□□□ 0.21
DDX39A-206ENST00000587730 OR10C1Q96KK4 312 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 DECR2Q9NUI1 292 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 TUBD1Q9UJT1 453 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 MRPS17Q9Y2R5 130 aaKnown RBP16.34■□□□□ 0.21
DDX39A-206ENST00000587730 K7EPK0 472 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 SIGLEC5O15389 551 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 EIF1BO60739 113 aaKnown RBP16.33■□□□□ 0.21
DDX39A-206ENST00000587730 HPNP05981 417 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 SLC2A1P11166 492 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 PNLIPP16233 465 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 CDAP32320 146 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 SIGLEC14Q08ET2 396 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 AVPI1Q5T686 147 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 SULF2Q8IWU5 870 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 FAM71E2Q8N5Q1 922 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 SNIP1Q8TAD8 396 aaKnown RBP16.33■□□□□ 0.21
DDX39A-206ENST00000587730 WDR77Q9BQA1 342 aaPredicted RBP16.33■□□□□ 0.21
DDX39A-206ENST00000587730 DUSP15Q9H1R2 295 aaPredicted RBP16.33■□□□□ 0.21
DDX39A-206ENST00000587730 NELFAQ9H3P2 528 aa16.33■□□□□ 0.21
DDX39A-206ENST00000587730 ATXN7L1Q9ULK2 861 aaPredicted RBP16.33■□□□□ 0.21
DDX39A-206ENST00000587730 IFNA4P05014 189 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 CSNK1A1P48729 337 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 AFF3P51826 1226 aaKnown RBP16.33■□□□□ 0.2
DDX39A-206ENST00000587730 AKR1C2P52895 323 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 S100A10P60903 97 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 S100A12P80511 92 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 AKR1C1Q04828 323 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 CARD17Q5XLA6 110 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 TMPPEQ6ZT21 453 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 SPACA9Q96E40 222 aaPredicted RBP16.33■□□□□ 0.2
DDX39A-206ENST00000587730 ZNF319Q9P2F9 582 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 ADAMTS9Q9P2N4 1935 aa16.33■□□□□ 0.2
DDX39A-206ENST00000587730 EXPH5Q8NEV8 1989 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 SHISA8B8ZZ34 492 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 RNASEK-C17orf49H0YIS7 233 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 MED6O75586 246 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 HKR1P10072 659 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 GLRA1P23415 457 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 HIST1H3AP68431 136 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 FAM3AP98173 230 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 MFAP5Q13361 173 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 FAM76BQ5HYJ3 339 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 HIST2H3PS2Q5TEC6 136 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 FAM69BQ5VUD6 431 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 SHEQ5VZ18 495 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 TMEM88Q6PEY1 159 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 HIST2H3AQ71DI3 136 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 OR10G3Q8NGC4 313 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 SPSB1Q96BD6 273 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 HRH4Q9H3N8 390 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 OR2S2Q9NQN1 319 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 RYDENQ9NUL5 291 aaKnown RBP16.32■□□□□ 0.2
DDX39A-206ENST00000587730 KPTNQ9Y664 436 aa16.32■□□□□ 0.2
DDX39A-206ENST00000587730 KCNAB3O43448 404 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 FBXO24O75426 580 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 HTR3BO95264 441 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 CD5P06127 495 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 HOXB1P14653 301 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 RPL12P30050 165 aaKnown RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 DVL1P1P54792 670 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 IAH1Q2TAA2 248 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 TMEM268Q5VZI3 342 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 TMEM200AQ86VY9 491 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 TMEM54Q969K7 222 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 SPTSSAQ969W0 71 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 GSKIPQ9P0R6 139 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 RARRES3Q9UL19 164 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 HSF4Q9ULV5 492 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 KCNIP3Q9Y2W7 256 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 TRIOO75962 3097 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 CRYM-AS1A6NIL9 109 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 LRP3O75074 770 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 DEDDO75618 318 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 SFTPBP07988 381 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 FOLR2P14207 255 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 PI3P19957 117 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 DTYMKP23919 212 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 OTX1P32242 354 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 RBM39Q14498 530 aaKnown RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 SWI5Q1ZZU3 235 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 TMEM176BQ3YBM2 270 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 BTNL8Q6UX41 500 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 PLXDC2Q6UX71 529 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 CBLN2Q8IUK8 224 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 UBAC2Q8NBM4 344 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 DMBX1Q8NFW5 382 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 GLYATL2Q8WU03 294 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 ROBO4Q8WZ75 1007 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 DNASE2BQ8WZ79 361 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 NAA11Q9BSU3 229 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 SMCO4Q9NRQ5 59 aa16.31■□□□□ 0.2
DDX39A-206ENST00000587730 FAM212BQ9NTI7 297 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-206ENST00000587730 A0A1W2PNR3 127 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 A0A1W2PP11 408 aa16.3■□□□□ 0.2
DDX39A-206ENST00000587730 ZNF98A6NK75 572 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms