RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 IGHV4-61A0A0C4DH41 118 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 LOC100289279A0A1B0GTE1 492 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 OR6C6A6NF89 314 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 OR5H1A6NKK0 313 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 CTDSPLO15194 276 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 SGCEO43556 437 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 SULT1B1O43704 296 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 NCR1O76036 304 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 PNPP00491 289 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 HLA-DQB1P01920 261 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 SLC2A2P11168 524 aaPredicted RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 PSKH1P11801 424 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 ZNF20P17024 532 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 COX5AP20674 150 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 CCL1P22362 96 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 USF1P22415 310 aaPredicted RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 CD40P25942 277 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 OTX1P32242 354 aaPredicted RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 CDAP32320 146 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 SOX2P48431 317 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 TPTEP56180 551 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 OR10A3P58181 314 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 MFGE8Q08431 387 aaPredicted RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 DBPQ10586 325 aaPredicted RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 ZNF79Q15937 498 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 STEAP3Q658P3 488 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 MZT2BQ6NZ67 158 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 CORO6Q6QEF8 472 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 Q6ZNX1 250 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 DCDC5Q6ZRR9 648 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 SPATC1Q76KD6 591 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 ZNF627Q7L945 461 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 COMMD2Q86X83 199 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 FBXL14Q8N1E6 418 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 CENPSQ8N2Z9 138 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 Q8N402 240 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 ZNF283Q8N7M2 679 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 POC5Q8NA72 575 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 OR5D14Q8NGL3 314 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 OR6M1Q8NGM8 313 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 DEDD2Q8WXF8 326 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 NABP1Q96AH0 204 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 PHF21AQ96BD5 680 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 MUCL1Q96DR8 90 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 S100A16Q96FQ6 103 aaKnown RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 RADILQ96JH8 1075 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 ALKBH3Q96Q83 286 aaPredicted RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 DHRS9Q9BPW9 319 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 UQCC2Q9BRT2 126 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 PBOV1Q9GZY1 135 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 SLC22A4Q9H015 551 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 OR10A2Q9H208 303 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 PPIL3Q9H2H8 161 aaKnown RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 RGCCQ9H4X1 137 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 EMC7Q9NPA0 242 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 ZNF275Q9NSD4 429 aaPredicted RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 FAIMQ9NVQ4 179 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 PLEK2Q9NYT0 353 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 UPB1Q9UBR1 384 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 STEAP1Q9UHE8 339 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 FBXL3Q9UKT7 428 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 SLC22A13Q9Y226 551 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 AK6Q9Y3D8 172 aaKnown RBP6.73□□□□□ -1.33
VMP1-204ENST00000587259 TIMM10BQ9Y5J6 103 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 SLC25A15Q9Y619 301 aa6.73□□□□□ -1.33
VMP1-204ENST00000587259 A0A0A6YYH2 397 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 LOC390937A0A1W2PQ73 354 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 CIB4A0PJX0 185 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 SMIM30A4D0T7 59 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 LRP5LA4QPB2 252 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 A6NJ64 397 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 CENPXA8MT69 81 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 ATP6V1G2-DDX39BF2Z307 99 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 M0R135 149 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 SLC17A2O00624 439 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 PIN1P1O15428 100 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 MAGEB3O15480 346 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 DOK2O60496 412 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 TTRP02766 147 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 ITGA5P08648 1049 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 ACSM4P0C7M7 580 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 COX5BP10606 129 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 IL7P13232 177 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 SLC25A16P16260 332 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 IGFBP3P17936 291 aaPredicted RBP6.72□□□□□ -1.33
VMP1-204ENST00000587259 ATF1P18846 271 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 ELK1P19419 428 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 RAB3AP20336 220 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 IL2RGP31785 369 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 GNALP38405 381 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 MNDAP41218 407 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 SLC6A9P48067 706 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 CAV3P56539 151 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 ZNF121P58317 390 aaPredicted RBP6.72□□□□□ -1.33
VMP1-204ENST00000587259 ASAH1Q13510 395 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 ENDOGQ14249 297 aaKnown RBP6.72□□□□□ -1.33
VMP1-204ENST00000587259 RAB11BQ15907 218 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 CEACAM16Q2WEN9 425 aa6.72□□□□□ -1.33
VMP1-204ENST00000587259 TIMM23BQ5SRD1 257 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms