RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 FAM76BQ5HYJ3 339 aa15.83■□□□□ 0.12
TRAF4-216ENST00000586813 C1QL4Q86Z23 238 aa15.83■□□□□ 0.12
TRAF4-216ENST00000586813 FAM110DQ8TAY7 271 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-216ENST00000586813 PIGCQ92535 297 aa15.83■□□□□ 0.12
TRAF4-216ENST00000586813 LYZL4Q96KX0 146 aa15.83■□□□□ 0.12
TRAF4-216ENST00000586813 OR51V1Q9H2C8 321 aa15.83■□□□□ 0.12
TRAF4-216ENST00000586813 MUC13Q9H3R2 512 aa15.83■□□□□ 0.12
TRAF4-216ENST00000586813 METTL8Q9H825 291 aaKnown RBP15.83■□□□□ 0.12
TRAF4-216ENST00000586813 NLKQ9UBE8 527 aa15.83■□□□□ 0.12
TRAF4-216ENST00000586813 ANKRD61A6NGH8 418 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 SELENOFO60613 162 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 NDUFB7P17568 137 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 PSMA6P60900 246 aaKnown RBP15.82■□□□□ 0.12
TRAF4-216ENST00000586813 FAM98BQ52LJ0 330 aaKnown RBP15.82■□□□□ 0.12
TRAF4-216ENST00000586813 DHFR2Q86XF0 187 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 ZDHHC23Q8IYP9 409 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 ZNF454Q8N9F8 522 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 OR8B12Q8NGG6 310 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 RNF170Q96K19 258 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 FEVQ99581 238 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 PPA2Q9H2U2 334 aa15.82■□□□□ 0.12
TRAF4-216ENST00000586813 OR2AT4A6NND4 320 aa15.81■□□□□ 0.12
TRAF4-216ENST00000586813 ACAA1P09110 424 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-216ENST00000586813 MNAT1P51948 309 aa15.81■□□□□ 0.12
TRAF4-216ENST00000586813 BLMHQ13867 455 aa15.81■□□□□ 0.12
TRAF4-216ENST00000586813 SLC35E4Q6ICL7 350 aa15.81■□□□□ 0.12
TRAF4-216ENST00000586813 PLBD1Q6P4A8 553 aa15.81■□□□□ 0.12
TRAF4-216ENST00000586813 BEND2Q8NDZ0 799 aa15.81■□□□□ 0.12
TRAF4-216ENST00000586813 THEM6Q8WUY1 208 aa15.81■□□□□ 0.12
TRAF4-216ENST00000586813 DUS3LQ96G46 650 aaKnown RBP15.81■□□□□ 0.12
TRAF4-216ENST00000586813 ELL3Q9HB65 397 aaPredicted RBP15.81■□□□□ 0.12
TRAF4-216ENST00000586813 KLHDC2Q9Y2U9 406 aa15.81■□□□□ 0.12
TRAF4-216ENST00000586813 IGKV1D-17A0A075B6S4 117 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 ARRDC5A6NEK1 342 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 PRR23D1E9PI22 279 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-216ENST00000586813 H3BUX3 64 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 RHBDL1O75783 438 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 CSF1P09603 554 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 PRR23D2P0DMB1 279 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-216ENST00000586813 GLRA1P23415 457 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 GABRA2P47869 451 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 GPM6AP51674 278 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 GK3PQ14409 553 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 PIGWQ7Z7B1 504 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 ARHGAP24Q8N264 748 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 PAPD5Q8NDF8 572 aaKnown RBP15.8■□□□□ 0.12
TRAF4-216ENST00000586813 GIPC3Q8TF64 312 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 TAS2R1Q9NYW7 299 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 FBLN5Q9UBX5 448 aa15.8■□□□□ 0.12
TRAF4-216ENST00000586813 PRODHO43272 600 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 POU1F1P28069 291 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 GABRA5P31644 462 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 MS4A2Q01362 244 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 TRIM25Q14258 630 aaKnown RBP15.79■□□□□ 0.12
TRAF4-216ENST00000586813 HCP5Q6MZN7 132 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 ZNRF1Q8ND25 227 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 TMEM185AQ8NFB2 350 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 FAM81AQ8TBF8 368 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 C17orf50Q8WW18 174 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 HIST1H2AAQ96QV6 131 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 NIPAL2Q9H841 368 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 ZNF222Q9UK12 451 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 LRP12Q9Y561 859 aa15.79■□□□□ 0.12
TRAF4-216ENST00000586813 TRBV23-1A0A0A0MS06 115 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 B2RBV5 119 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 ZNF732B4DXR9 585 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 H0YAE9 185 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 RAP2AP10114 183 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 PSG2P11465 335 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 GNG3P63215 75 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 CEP78Q5JTW2 689 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 KRT74Q7RTS7 529 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 OR5D13Q8NGL4 314 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 PPP1R35Q8TAP8 253 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 SSX3Q99909 188 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 OR51I2Q9H344 312 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 SF3B6Q9Y3B4 125 aaKnown RBP15.78■□□□□ 0.12
TRAF4-216ENST00000586813 MAB21L2Q9Y586 359 aa15.78■□□□□ 0.12
TRAF4-216ENST00000586813 ATP8B1O43520 1251 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 ANGPTL7O43827 346 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 ALOX5APP20292 161 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 MAP2K3P46734 347 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 GNGT1P63211 74 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 GINS1Q14691 196 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 HERPUD1Q15011 391 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 CEACAM21Q3KPI0 293 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 Q6ZTK2 550 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 KRT77Q7Z794 578 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 CPOQ8IVL8 374 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 FAM185AQ8N0U4 392 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 BBS1Q8NFJ9 593 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 OR51G2Q8NGK0 314 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 AJUBAQ96IF1 538 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 FAM234AQ9H0X4 552 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 LAMP5Q9UJQ1 280 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 SIGLEC9Q9Y336 463 aa15.77■□□□□ 0.12
TRAF4-216ENST00000586813 PLXNB1O43157 2135 aa15.76■□□□□ 0.11
TRAF4-216ENST00000586813 A0A0U1RQV5 110 aa15.76■□□□□ 0.11
TRAF4-216ENST00000586813 CST1P01037 141 aa15.76■□□□□ 0.11
TRAF4-216ENST00000586813 EFNB2P52799 333 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms