RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 RAB3CQ96E17 227 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 POM121Q96HA1 1249 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 FAM210AQ96ND0 272 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 SPACA5Q96QH8 159 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 GON7Q9BXV9 100 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 SELENOIQ9C0D9 397 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 METTL9Q9H1A3 318 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 DEFB127Q9H1M4 99 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 OPA3Q9H6K4 179 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 PCDHB16Q9NRJ7 776 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 ANAPC10Q9UM13 185 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 SLC7A11Q9UPY5 501 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 LIPGQ9Y5X9 500 aa9.81□□□□□ -0.84
LIG3-204ENST00000585740 ZNF816-ZNF321PA0A0X1KG74 233 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 SLC22A20A6NK97 555 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 CYSRT1A8MQ03 144 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 FABP7O15540 132 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 ATP6V1G1O75348 118 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 NRASP01111 189 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 HPXP02790 462 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 RLN1P04808 185 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 NAT1P18440 290 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 ANOS1P23352 680 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 CPT2P23786 658 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 MPGP29372 298 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 FUT6P51993 359 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 ATP1B3P54709 279 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 IFITM2Q01629 132 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 PLP2Q04941 152 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 RTP5Q14D33 572 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 OR8B8Q15620 311 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 SLC22A6Q4U2R8 563 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 COLCA1Q6ZS62 124 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 P4HA3Q7Z4N8 544 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 ZDHHC22Q8N966 263 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 BEST4Q8NFU0 473 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 FDCSPQ8NFU4 85 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 DVL3Q92997 716 aaPredicted RBP9.8□□□□□ -0.84
LIG3-204ENST00000585740 BORCS8Q96FH0 119 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 GMPPAQ96IJ6 420 aaPredicted RBP9.8□□□□□ -0.84
LIG3-204ENST00000585740 SEC22CQ9BRL7 303 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 TMEM246Q9BRR3 403 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 ZNF436Q9C0F3 470 aaPredicted RBP9.8□□□□□ -0.84
LIG3-204ENST00000585740 BEX1Q9HBH7 125 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 GPR173Q9NS66 373 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 MGAT4CQ9UBM8 478 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 ZNF69Q9UC07 566 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 KCNN3Q9UGI6 736 aa9.8□□□□□ -0.84
LIG3-204ENST00000585740 A0A0A6YYD4 124 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 TMEM82A0PJX8 343 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 WIPF3A6NGB9 483 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 MFNGO00587 321 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 AQP7O14520 342 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 CEACAM4O75871 244 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 IFNA6P05013 189 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 GIPP09681 153 aaPredicted RBP9.79□□□□□ -0.84
LIG3-204ENST00000585740 PATE4P0C8F1 98 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 ZNF735P0CB33 412 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 MGMTP16455 207 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 GNB3P16520 340 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 ANXA7P20073 488 aaKnown RBP9.79□□□□□ -0.84
LIG3-204ENST00000585740 AGTR1P30556 359 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 RBP2P50120 134 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 MTCP1P56278 107 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 ZP1P60852 638 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 RAP2BP61225 183 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 FAM3AP98173 230 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 HGFACQ04756 655 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 MALLQ13021 153 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 GK2Q14410 553 aaPredicted RBP9.79□□□□□ -0.84
LIG3-204ENST00000585740 PLXDC2Q6UX71 529 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 SEZ6L2Q6UXD5 910 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 IDO2Q6ZQW0 420 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 NUFIP2Q7Z417 695 aaKnown RBP9.79□□□□□ -0.84
LIG3-204ENST00000585740 TMEM104Q8NE00 496 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 OR4D10Q8NGI6 311 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 OR2AE1Q8NHA4 323 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 GRPEL2Q8TAA5 225 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 FGFBP3Q8TAT2 258 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 PIGTQ969N2 578 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 APOBEC3DQ96AK3 386 aaPredicted RBP9.79□□□□□ -0.84
LIG3-204ENST00000585740 RADILQ96JH8 1075 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 OCSTAMPQ9BR26 566 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 NICN1Q9BSH3 213 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 TINAGL1Q9GZM7 467 aaPredicted RBP9.79□□□□□ -0.84
LIG3-204ENST00000585740 BANF2Q9H503 90 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 ZMAT3Q9HA38 289 aaKnown RBP9.79□□□□□ -0.84
LIG3-204ENST00000585740 DLL4Q9NR61 685 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 SPRR3Q9UBC9 169 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 FREM1Q5H8C1 2179 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 APC2O95996 2303 aa9.79□□□□□ -0.84
LIG3-204ENST00000585740 ACACAQ13085 2346 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 RTTNQ86VV8 2226 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 SERPINE3A8MV23 424 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 M0QYG6 137 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 SOCS1O15524 211 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 SS18L1O75177 396 aaPredicted RBP9.78□□□□□ -0.84
LIG3-204ENST00000585740 IGHV3-9P01782 118 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 TMEM225BP0DP42 221 aa9.78□□□□□ -0.84
LIG3-204ENST00000585740 VSIG10L2P0DP72 767 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms