RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 RBM38Q9H0Z9 239 aaKnown RBP11.04□□□□□ -0.64
TRIM47-202ENST00000585333 DCSTAMPQ9H295 470 aa11.04□□□□□ -0.64
TRIM47-202ENST00000585333 TPK1Q9H3S4 243 aa11.04□□□□□ -0.64
TRIM47-202ENST00000585333 CXorf56Q9H5V9 222 aa11.04□□□□□ -0.64
TRIM47-202ENST00000585333 UBTD1Q9HAC8 227 aa11.04□□□□□ -0.64
TRIM47-202ENST00000585333 DECR2Q9NUI1 292 aa11.04□□□□□ -0.64
TRIM47-202ENST00000585333 FZR1Q9UM11 496 aa11.04□□□□□ -0.64
TRIM47-202ENST00000585333 V9GY05 133 aa11.04□□□□□ -0.64
TRIM47-202ENST00000585333 RTTNQ86VV8 2226 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 A6NHS1 94 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 CYSRT1A8MQ03 144 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 NOTOA8MTQ0 251 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 H3BMQ9 156 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 H3BUI4 141 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 PIN1P1O15428 100 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 CDRT1O95170 752 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 PLAUP00749 431 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 CFPP27918 469 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 RORCP51449 518 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 MTCP1P56278 107 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 VBP1P61758 197 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 TNFAIP6P98066 277 aaPredicted RBP11.03□□□□□ -0.64
TRIM47-202ENST00000585333 DYNC1I2Q13409 638 aaKnown RBP11.03□□□□□ -0.64
TRIM47-202ENST00000585333 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 MKXQ8IYA7 352 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 Q8IYB0 196 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 SAXO1Q8IYX7 474 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 JAGN1Q8N5M9 183 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 ZSCAN4Q8NAM6 433 aaPredicted RBP11.03□□□□□ -0.64
TRIM47-202ENST00000585333 LILRB1Q8NHL6 650 aaPredicted RBP11.03□□□□□ -0.64
TRIM47-202ENST00000585333 ZNF671Q8TAW3 534 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 NEU4Q8WWR8 484 aaPredicted RBP11.03□□□□□ -0.64
TRIM47-202ENST00000585333 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 RPL3LQ92901 407 aaKnown RBP11.03□□□□□ -0.64
TRIM47-202ENST00000585333 C12orf43Q96C57 262 aaKnown RBP11.03□□□□□ -0.64
TRIM47-202ENST00000585333 PKIBQ9C010 78 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 FN3KRPQ9HA64 309 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 PLGRKTQ9HBL7 147 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 GPR173Q9NS66 373 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 CADP27708 2225 aa11.03□□□□□ -0.64
TRIM47-202ENST00000585333 TRAV8-7A0A075B6U6 113 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 FAM230AA0A1W2PPH8 454 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 A0A1W2PPK0 400 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 PQLC2LA1A4F0 135 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 LRRC30A6NM36 301 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 H7C417 338 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 AIPO00170 330 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 TPD52L2O43399 206 aaKnown RBP11.02□□□□□ -0.65
TRIM47-202ENST00000585333 MAS1P04201 325 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 IRF2P14316 349 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 SDC2P34741 201 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 GATA4P43694 442 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 NCS1P62166 190 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 LSM3P62310 102 aaKnown RBP11.02□□□□□ -0.65
TRIM47-202ENST00000585333 INSL4Q14641 139 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 KISS1Q15726 138 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 UBE2V2Q15819 145 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 DGUOKQ16854 277 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 CEP78Q5JTW2 689 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 FIP1L1Q6UN15 594 aaKnown RBP11.02□□□□□ -0.65
TRIM47-202ENST00000585333 LRP11Q86VZ4 500 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 C1orf87Q8N0U7 546 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 OR11L1Q8NGX0 322 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 SLC25A46Q96AG3 418 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 TRMT61AQ96FX7 289 aaKnown RBP11.02□□□□□ -0.65
TRIM47-202ENST00000585333 SOX7Q9BT81 388 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 TRAF4Q9BUZ4 470 aaPredicted RBP11.02□□□□□ -0.65
TRIM47-202ENST00000585333 MSL2Q9HCI7 577 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 CCDC59Q9P031 241 aaKnown RBP11.02□□□□□ -0.65
TRIM47-202ENST00000585333 SPTAN1Q13813 2472 aaKnown RBP11.02□□□□□ -0.65
TRIM47-202ENST00000585333 MAST4O15021 2626 aa11.02□□□□□ -0.65
TRIM47-202ENST00000585333 ZNF732B4DXR9 585 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 J3QT63 122 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 SLC17A2O00624 439 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 SPRY3O43610 288 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 LMX1BO60663 402 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 PTBP3O95758 552 aaKnown RBP11.01□□□□□ -0.65
TRIM47-202ENST00000585333 BPNT1O95861 308 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 DANCRP0C864 163 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 ANOS1P23352 680 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 ALDH3B1P43353 468 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 GPM6AP51674 278 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 MRPS11P82912 194 aaKnown RBP11.01□□□□□ -0.65
TRIM47-202ENST00000585333 RAB11BQ15907 218 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 FAM76BQ5HYJ3 339 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 FAM27D1Q5T7N8 215 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 MZT2AQ6P582 158 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 LRRTM1Q86UE6 522 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 PXT1Q8NFP0 134 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 NEUROG1Q92886 237 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 POM121Q96HA1 1249 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 CST11Q9H112 138 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 SAP30LQ9HAJ7 183 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 BARX1Q9HBU1 254 aaPredicted RBP11.01□□□□□ -0.65
TRIM47-202ENST00000585333 MYOZ1Q9NP98 299 aaPredicted RBP11.01□□□□□ -0.65
TRIM47-202ENST00000585333 PRR14LQ5THK1 2151 aa11.01□□□□□ -0.65
TRIM47-202ENST00000585333 USP9YO00507 2555 aaPredicted RBP11□□□□□ -0.65
TRIM47-202ENST00000585333 PLCE1Q9P212 2302 aa11□□□□□ -0.65
TRIM47-202ENST00000585333 IGKV1-9A0A0C4DH69 117 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms