RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 DUX4L3P0CJ86 424 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 DUX4L4P0CJ87 422 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 DUX4L5P0CJ88 424 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 DUX4L6P0CJ89 424 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 DUX4L7P0CJ90 424 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 PAICSP22234 425 aaKnown RBP12.3□□□□□ -0.44
VAPA-209ENST00000585042 CBX1P83916 185 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 IKZF1Q13422 519 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 BLMHQ13867 455 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 C2orf68Q2NKX9 166 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 C11orf88Q6PI97 169 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 DUX4L9Q6RFH8 374 aaPredicted RBP12.3□□□□□ -0.44
VAPA-209ENST00000585042 FGFRL1Q8N441 504 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 PAPD5Q8NDF8 572 aaKnown RBP12.3□□□□□ -0.44
VAPA-209ENST00000585042 OR10G2Q8NGC3 310 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 ANGPTL6Q8NI99 470 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 ZNF556Q9HAH1 456 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 ARMC1Q9NVT9 282 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 DNAJB9Q9UBS3 223 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 DUX4Q9UBX2 424 aa12.3□□□□□ -0.44
VAPA-209ENST00000585042 ZNF816-ZNF321PA0A0X1KG74 233 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 ACOD1A6NK06 481 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 SIGLEC5O15389 551 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 SOX14O95416 240 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 LYNP07948 512 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 PPP1R8Q12972 351 aaKnown RBP12.29□□□□□ -0.44
VAPA-209ENST00000585042 PRDX4Q13162 271 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 AANATQ16613 207 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 BEND2Q8NDZ0 799 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 OR5T2Q8NGG2 359 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 OR5D13Q8NGL4 314 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 OTOSQ8NHW6 89 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 TEX47Q8TBZ9 253 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 H1FXQ92522 213 aaKnown RBP12.29□□□□□ -0.44
VAPA-209ENST00000585042 SEH1LQ96EE3 360 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 RNF170Q96K19 258 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 HIST1H2AAQ96QV6 131 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 PKP2Q99959 881 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 FAM234AQ9H0X4 552 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 PPP1R3EQ9H7J1 279 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 DNAJC27Q9NZQ0 273 aa12.29□□□□□ -0.44
VAPA-209ENST00000585042 SLC25A10Q9UBX3 287 aaPredicted RBP12.29□□□□□ -0.44
VAPA-209ENST00000585042 SF3B6Q9Y3B4 125 aaKnown RBP12.29□□□□□ -0.44
VAPA-209ENST00000585042 MEIOCA2RUB1 952 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 ZNF850A8MQ14 1090 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 ANXA8P13928 327 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 DCTDP32321 178 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 SAA4P35542 130 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 ELF3P78545 371 aaPredicted RBP12.28□□□□□ -0.44
VAPA-209ENST00000585042 C10orf67Q8IYJ2 551 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 ZNF671Q8TAW3 534 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 RPL3LQ92901 407 aaKnown RBP12.28□□□□□ -0.44
VAPA-209ENST00000585042 GAFA1Q96PS6 74 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 AMELYQ99218 206 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 FEVQ99581 238 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 MEGF9Q9H1U4 602 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 WDR13Q9H1Z4 485 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 BRD7Q9NPI1 651 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 NLKQ9UBE8 527 aa12.28□□□□□ -0.44
VAPA-209ENST00000585042 TRBV23-1A0A0A0MS06 115 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 ANKRD61A6NGH8 418 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 FAM183AA6NL82 134 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 OR2AT4A6NND4 320 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 PRR23D1E9PI22 279 aaPredicted RBP12.27□□□□□ -0.45
VAPA-209ENST00000585042 PRODHO43272 600 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 PRR23D2P0DMB1 279 aaPredicted RBP12.27□□□□□ -0.45
VAPA-209ENST00000585042 FCGR1AP12314 374 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 ATP6V1B1P15313 513 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 ACKR3P25106 362 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 KIR2DS4P43632 304 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 MAP2K3P46734 347 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 DGUOKQ16854 277 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 GFOD2Q3B7J2 385 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 SLC35E4Q6ICL7 350 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 DEGS2Q6QHC5 323 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 ZDHHC23Q8IYP9 409 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 THEM6Q8WUY1 208 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 PIGCQ92535 297 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 NRBF2Q96F24 287 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 NIPSNAP1Q9BPW8 284 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 TEX12Q9BXU0 123 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 SEMA6AQ9H2E6 1030 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 MED20Q9H944 212 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 SNTG1Q9NSN8 517 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 VNN3Q9NY84 501 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 RASL12Q9NYN1 266 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 CMYA5Q8N3K9 4069 aa12.27□□□□□ -0.45
VAPA-209ENST00000585042 A0A0U1RQV5 110 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 A0A1W2PQ09 198 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 H3BN98 237 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 AKR7A2O43488 359 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 TSPAN15O95858 294 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 HMGN1P05114 100 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 CSF1P09603 554 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 NDUFB7P17568 137 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 GLRA1P23415 457 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 FASP25445 335 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 POU1F1P28069 291 aa12.26□□□□□ -0.45
VAPA-209ENST00000585042 GNG3P63215 75 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms