RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ADAT1Q9BUB4 502 aaKnown RBP14.7□□□□□ -0.06
TOP3A-220ENST00000585031 DGCR6LQ9BY27 220 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 NUAK2Q9H093 628 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 PCDHGB5Q9Y5G0 923 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 CD300LBA8K4G0 201 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 EFCAB9A8MZ26 197 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 F5H5K5 113 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 AHCYL1O43865 530 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 TFF1P04155 84 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 UBE2E1P51965 193 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 IL5RAQ01344 420 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 GUCA2AQ02747 115 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 PCK2Q16822 640 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 ZNF770Q6IQ21 691 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-220ENST00000585031 PGAP1Q75T13 922 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 GJC3Q8NFK1 279 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 OR4F17Q8NGA8 305 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 SPRYD4Q8WW59 207 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-220ENST00000585031 OR4F4Q96R69 305 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 B9D2Q9BPU9 175 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 FUZQ9BT04 418 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 DCTN5Q9BTE1 182 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 HDHD2Q9H0R4 259 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 ZNF702PQ9H963 129 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 TRIM36Q9NQ86 728 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 STAB2Q8WWQ8 2551 aa14.69□□□□□ -0.06
TOP3A-220ENST00000585031 XKRYO14609 159 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 LCATP04180 440 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 SMIM18P0DKX4 95 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 RPL4P36578 427 aaKnown RBP14.68□□□□□ -0.06
TOP3A-220ENST00000585031 GPR4P46093 362 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 ZNF92Q03936 586 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 CD69Q07108 199 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 KRR1Q13601 381 aaKnown RBP14.68□□□□□ -0.06
TOP3A-220ENST00000585031 APOFQ13790 326 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 PGBD2Q6P3X8 592 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 ZNF730Q6ZMV8 503 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 WDR86Q86TI4 376 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 NDUFA11Q86Y39 141 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 LINC00346Q8IVM7 164 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 PLPP7Q8NBV4 271 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 OR2AE1Q8NHA4 323 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 SLC7A13Q8TCU3 470 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 GNPDA2Q8TDQ7 276 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 HRASLS5Q96KN8 279 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 NIPSNAP1Q9BPW8 284 aa14.68□□□□□ -0.06
TOP3A-220ENST00000585031 RANBP3Q9H6Z4 567 aaPredicted RBP14.68□□□□□ -0.06
TOP3A-220ENST00000585031 PNRC2Q9NPJ4 139 aaKnown RBP14.68□□□□□ -0.06
TOP3A-220ENST00000585031 A6NHS1 94 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 GMDSO60547 372 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 GASTP01350 101 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 OSMP13725 252 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 GGT2P36268 569 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 POLR2IP36954 125 aaKnown RBP14.67□□□□□ -0.06
TOP3A-220ENST00000585031 CDKN2AP42771 156 aaKnown RBP14.67□□□□□ -0.06
TOP3A-220ENST00000585031 RPL5P46777 297 aaKnown RBP14.67□□□□□ -0.06
TOP3A-220ENST00000585031 GABARAPL2P60520 117 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 SEC23BQ15437 767 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 SNAI3Q3KNW1 292 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 C6orf141Q5SZD1 244 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 CD300LDQ6UXZ3 194 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 C8orf46Q8TAG6 207 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 ACOT11Q8WXI4 607 aaPredicted RBP14.67□□□□□ -0.06
TOP3A-220ENST00000585031 FAM192AQ9GZU8 254 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 NDUFA13Q9P0J0 144 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 POLR1DQ9Y2S0 133 aa14.67□□□□□ -0.06
TOP3A-220ENST00000585031 LYSTQ99698 3801 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 A0A087WUU8 490 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 hCG_1807616A0A1W2PRN6 198 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 HTR3EA5X5Y0 456 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 DPPA5A6NC42 116 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 A6NLC8 198 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 E9PQ18 207 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 CCDC159P0C7I6 412 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 ATP6V1B1P15313 513 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 TGM4P49221 684 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 CRISP1P54107 249 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 FXYD6P3P58550 94 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 CDC42P60953 191 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 ISL1P61371 349 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 CSNK2BP67870 215 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 IKZF1Q13422 519 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 ANKDD1AQ495B1 522 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 ZBED5Q49AG3 693 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 SLC18B1Q6NT16 456 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 Q6ZS46 218 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 CMTM4Q8IZR5 234 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 OR5T2Q8NGG2 359 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 FBLIM1Q8WUP2 373 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 DMRTB1Q96MA1 342 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 MEGF9Q9H1U4 602 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 PPP1R3EQ9H7J1 279 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 VCX3AQ9NNX9 186 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 IMPAD1Q9NX62 359 aa14.66□□□□□ -0.06
TOP3A-220ENST00000585031 IGLV1-36A0A0B4J1U3 117 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 MPZL2O60487 215 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 PTP4A3O75365 173 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 CD33P20138 364 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 BMXP51813 675 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 CXCR4P61073 352 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms