RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 IER3P46695 156 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 GABRA2P47869 451 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 CDK5Q00535 292 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 APOFQ13790 326 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 SLC35D3Q5M8T2 416 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 LDLRAD3Q86YD5 345 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 GAFA1Q96PS6 74 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 TTTY10Q9BZA0 68 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 SLC25A10Q9UBX3 287 aaPredicted RBP16.8■□□□□ 0.28
TOP3A-219ENST00000584887 CAB39Q9Y376 341 aaPredicted RBP16.8■□□□□ 0.28
TOP3A-219ENST00000584887 RNF114Q9Y508 228 aa16.8■□□□□ 0.28
TOP3A-219ENST00000584887 ZNF816-ZNF321PA0A0X1KG74 233 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 GPR37O15354 613 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 FBP1P09467 338 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 ANXA8P13928 327 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 ALOX5APP20292 161 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 RPL15P61313 204 aaKnown RBP16.79■□□□□ 0.28
TOP3A-219ENST00000584887 CBX1P83916 185 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 DEFA6Q01524 100 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 GUCA2AQ02747 115 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 FLOT2Q14254 428 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 DGUOKQ16854 277 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 DMRTC1Q5HYR2 192 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 CEP78Q5JTW2 689 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 ATPAF1Q5TC12 328 aaPredicted RBP16.79■□□□□ 0.28
TOP3A-219ENST00000584887 MED30Q96HR3 178 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 C1orf21Q9H246 121 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 ELL3Q9HB65 397 aaPredicted RBP16.79■□□□□ 0.28
TOP3A-219ENST00000584887 TVP23BQ9NYZ1 205 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 NLKQ9UBE8 527 aa16.79■□□□□ 0.28
TOP3A-219ENST00000584887 RNASEK-C17orf49H0YIS7 233 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 NPFFO15130 113 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 PAHP00439 452 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 SLC2A5P22732 501 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 GLRA1P23415 457 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 MAP2K3P46734 347 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 SNAPC1Q16533 368 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 MIDNQ504T8 468 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 DHRS7BQ6IAN0 325 aaPredicted RBP16.78■□□□□ 0.28
TOP3A-219ENST00000584887 THAP5Q7Z6K1 395 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 PNKDQ8N490 385 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 PAPD5Q8NDF8 572 aaKnown RBP16.78■□□□□ 0.28
TOP3A-219ENST00000584887 LRTOMTQ8WZ04 291 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 DNTTIP1Q9H147 329 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 YY1AP1Q9H869 796 aa16.78■□□□□ 0.28
TOP3A-219ENST00000584887 TMEM269A0A1B0GVZ9 245 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 OR2AT4A6NND4 320 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 ZNF732B4DXR9 585 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 FKBP6O75344 327 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 RHBDL1O75783 438 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 GNG3P63215 75 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 KCTD18Q6PI47 426 aaPredicted RBP16.77■□□□□ 0.28
TOP3A-219ENST00000584887 GDPGP1Q6ZNW5 385 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 ZNF788Q6ZQV5 615 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 Q8N7P7 452 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 TMEM185AQ8NFB2 350 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 ANGPTL6Q8NI99 470 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 CITED1Q99966 193 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 YIPF3Q9GZM5 350 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 SLC25A19Q9HC21 320 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 DNAJB9Q9UBS3 223 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 IKZF2Q9UKS7 526 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 GTF2A1LQ9UNN4 478 aa16.77■□□□□ 0.28
TOP3A-219ENST00000584887 MEIOCA2RUB1 952 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 M0QZ24 198 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 SIGLEC5O15389 551 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 GYG2O15488 501 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 HOXB6P17509 224 aaKnown RBP16.76■□□□□ 0.27
TOP3A-219ENST00000584887 DCTDP32321 178 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 CAPZA1P52907 286 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 TAF9Q16594 264 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 LCN1P1Q5VSP4 162 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 PLCXD3Q63HM9 321 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 METAP1DQ6UB28 335 aaPredicted RBP16.76■□□□□ 0.27
TOP3A-219ENST00000584887 MOB3CQ70IA8 216 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 LINC01006Q8NI28 216 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 C8orf46Q8TAG6 207 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 OR51E1Q8TCB6 317 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 DMRTB1Q96MA1 342 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 MROQ9BYG7 248 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 PBOV1Q9GZY1 135 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 GPR84Q9NQS5 396 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 PAPOLBQ9NRJ5 636 aaKnown RBP16.76■□□□□ 0.27
TOP3A-219ENST00000584887 FAM206AQ9NX38 181 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 ZNRD1Q9P1U0 126 aa16.76■□□□□ 0.27
TOP3A-219ENST00000584887 TIMM23O14925 209 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 GSC2O15499 205 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 ACAA1P09110 424 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-219ENST00000584887 FAHP16930 419 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 SAA4P35542 130 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 KRTAP10-3P60369 221 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 BLMHQ13867 455 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 ZNF829Q3KNS6 432 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-219ENST00000584887 DNAL1Q4LDG9 190 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 FAM76BQ5HYJ3 339 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 HAGHLQ6PII5 290 aaPredicted RBP16.75■□□□□ 0.27
TOP3A-219ENST00000584887 FAM185AQ8N0U4 392 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 NPRL2Q8WTW4 380 aa16.75■□□□□ 0.27
TOP3A-219ENST00000584887 DUS3LQ96G46 650 aaKnown RBP16.75■□□□□ 0.27
TOP3A-219ENST00000584887 OR51I2Q9H344 312 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms