RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 RGPD2P0DJD1 1756 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 MICAL3Q7RTP6 2002 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 MAST2Q6P0Q8 1798 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 PAX5Q02548 391 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 INPP5JQ15735 1006 aaPredicted RBP11.71□□□□□ -0.53
RNF43-208ENST00000584437 OR2C3Q8N628 320 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 LHFPL5Q8TAF8 219 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 POM121L2Q96KW2 1035 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 ASB16Q96NS5 453 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 GNB4Q9HAV0 340 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 Q9N2K0 584 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 ANKRD10Q9NXR5 420 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 FBXL17Q9UF56 701 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 KCNE3Q9Y6H6 103 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 V9GYH0 126 aa11.71□□□□□ -0.53
RNF43-208ENST00000584437 FUT7Q11130 342 aa11.71□□□□□ -0.54
RNF43-208ENST00000584437 Q8IYB0 196 aa11.71□□□□□ -0.54
RNF43-208ENST00000584437 SPPL3Q8TCT6 385 aa11.71□□□□□ -0.54
RNF43-208ENST00000584437 WDR61Q9GZS3 305 aaKnown RBP11.71□□□□□ -0.54
RNF43-208ENST00000584437 OCIAD1Q9NX40 245 aa11.71□□□□□ -0.54
RNF43-208ENST00000584437 TJP1Q07157 1748 aa11.71□□□□□ -0.54
RNF43-208ENST00000584437 ST8SIA5O15466 376 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 PIAS2O75928 621 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 B4GALNT1Q00973 533 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 OR5I1Q13606 314 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 FBXL6Q8N531 539 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 CLDN23Q96B33 292 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 TIMM9Q9Y5J7 89 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 LAMA4Q16363 1823 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 POM121BA6NF01 834 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 B4DEV8 164 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 YIF1AO95070 293 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 RPS16P62249 146 aaKnown RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 RPL11P62913 178 aaKnown RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 FAM3AP98173 230 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 SLC38A11Q08AI6 406 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 SMIM21Q3B7S5 101 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 SP6Q3SY56 376 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 Q6ZNB5 142 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 RTN4RL1Q86UN2 441 aaPredicted RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 FBXL14Q8N1E6 418 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 ADPRHL1Q8NDY3 354 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 ROBO4Q8WZ75 1007 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 NWD2Q9ULI1 1742 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 KCNE1BA0A087WTH5 132 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 CCR5P51681 352 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 INSM1Q01101 510 aaPredicted RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 COX19Q49B96 90 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 IGSF11Q5DX21 431 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 KMT5CQ86Y97 462 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 ZNF687Q8N1G0 1237 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 APOBEC3DQ96AK3 386 aaPredicted RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 ELSPBP1Q96BH3 223 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 KLF13Q9Y2Y9 288 aaPredicted RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 PLCH1Q4KWH8 1693 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 FAM166BA8MTA8 275 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 SPRY1O43609 319 aaPredicted RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 CXCL13O43927 109 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 ONECUT2O95948 504 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 PEX11BO96011 259 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 SURF2Q15527 256 aaPredicted RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 RSPO2Q6UXX9 243 aaPredicted RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 THOC3Q96J01 351 aaKnown RBP11.7□□□□□ -0.54
RNF43-208ENST00000584437 PRDM7Q9NQW5 492 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 A0A087X0M5 115 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 A0A1B0GX30 115 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 PRRT4C9JH25 899 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 GPM6AP51674 278 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 FOXF1Q12946 379 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 IFI44Q8TCB0 444 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 WBP2Q969T9 261 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 TIMD4Q96H15 378 aa11.7□□□□□ -0.54
RNF43-208ENST00000584437 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 CNTRLQ7Z7A1 2325 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 A0A1W2PNV4 684 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 TMEM30CPA0ZSE6 113 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 RBFOX3A6NFN3 312 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 SNCGO76070 127 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 SELENOPP49908 381 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 GNB1P62873 340 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 KCNAB1Q14722 419 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 KISS1Q15726 138 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 CEBPEQ15744 281 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 ATP6V1FQ16864 119 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 KTI12Q96EK9 354 aaPredicted RBP11.69□□□□□ -0.54
RNF43-208ENST00000584437 SLC45A2Q9UMX9 530 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 ZNF737O75373 536 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 SPCS3P61009 180 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 HTRA3P83110 453 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 ZNF816Q0VGE8 651 aaPredicted RBP11.69□□□□□ -0.54
RNF43-208ENST00000584437 MLF2Q15773 248 aaPredicted RBP11.69□□□□□ -0.54
RNF43-208ENST00000584437 ZNF718Q3SXZ3 478 aa11.69□□□□□ -0.54
RNF43-208ENST00000584437 JMJD6Q6NYC1 403 aaPredicted RBP11.69□□□□□ -0.54
RNF43-208ENST00000584437 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.69□□□□□ -0.54
RNF43-208ENST00000584437 SIRT3Q9NTG7 399 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms