RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 FAM3AP98173 230 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 ODF4Q2M2E3 257 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 C6orf141Q5SZD1 244 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 BCL2L15Q5TBC7 163 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 AHSA2Q719I0 299 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 COMMD2Q86X83 199 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 OR56B2PQ8NGI1 322 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 OR51E1Q8TCB6 317 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 RORBQ92753 470 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 SPSB4Q96A44 273 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 DACT3Q96B18 629 aaPredicted RBP13.06□□□□□ -0.32
SKA2-209ENST00000583976 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 ZNF184Q99676 751 aaPredicted RBP13.06□□□□□ -0.32
SKA2-209ENST00000583976 MS4A7Q9GZW8 240 aaPredicted RBP13.06□□□□□ -0.32
SKA2-209ENST00000583976 ISG20L2Q9H9L3 353 aaKnown RBP13.06□□□□□ -0.32
SKA2-209ENST00000583976 ZMAT3Q9HA38 289 aaKnown RBP13.06□□□□□ -0.32
SKA2-209ENST00000583976 TMEM100Q9NV29 134 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 RAB26Q9ULW5 256 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 LRCH1Q9Y2L9 728 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 SNX5Q9Y5X3 404 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 IGHV2-70DA0A0C4DH43 119 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 hCG_38984A0A1B0GV85 526 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 EFCAB10A6NFE3 127 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 ACOD1A6NK06 481 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 PTGES3LE9PB15 166 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 H3BSH0 61 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 TTRP02766 147 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 HLA-DPB1P04440 258 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 OMGP23515 440 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 DCKP27707 260 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 GSK3AP49840 483 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 ETV1P50549 477 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 ACTA2P62736 377 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 ACTG2P63267 376 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 PAX8Q06710 450 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 ST3GAL4Q11206 333 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 KCTD20Q7Z5Y7 419 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 KLBQ86Z14 1044 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 C19orf18Q8NEA5 215 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 MRPL48Q96GC5 212 aaKnown RBP13.05□□□□□ -0.32
SKA2-209ENST00000583976 FAM71F1Q96KD3 344 aaPredicted RBP13.05□□□□□ -0.32
SKA2-209ENST00000583976 ZNF649Q9BS31 505 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 OPA3Q9H6K4 179 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 GPR84Q9NQS5 396 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 INPP5EQ9NRR6 644 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 PLCXD1Q9NUJ7 323 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 NUFIP1Q9UHK0 495 aaKnown RBP13.05□□□□□ -0.32
SKA2-209ENST00000583976 CLEC2DQ9UHP7 191 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 PSORS1C1Q9UIG5 152 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 PCDHGB5Q9Y5G0 923 aa13.05□□□□□ -0.32
SKA2-209ENST00000583976 F5H5P2 479 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 SLC1A7O00341 560 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 P2RY10O00398 339 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 PLATP00750 562 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 WNT2P09544 360 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 LIMS3P0CW19 117 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 LIMS4P0CW20 117 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 CA6P23280 308 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 CFL1P23528 166 aaKnown RBP13.04□□□□□ -0.32
SKA2-209ENST00000583976 SRSF4Q08170 494 aaKnown RBP13.04□□□□□ -0.32
SKA2-209ENST00000583976 WDR38Q5JTN6 314 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 TREML4Q6UXN2 200 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 BRD3OSQ6XYD6 125 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 CATSPERDQ86XM0 798 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 ELMOD2Q8IZ81 293 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 MUC20Q8N307 709 aaPredicted RBP13.04□□□□□ -0.32
SKA2-209ENST00000583976 STX19Q8N4C7 294 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 OR13G1Q8NGZ3 307 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 SLC25A28Q96A46 364 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 UPRTQ96BW1 309 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 PELI1Q96FA3 418 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 SLC30A2Q9BRI3 323 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 TMEM246Q9BRR3 403 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 RGCCQ9H4X1 137 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 MOB1AQ9H8S9 216 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 CHCHD3Q9NX63 227 aaKnown RBP13.04□□□□□ -0.32
SKA2-209ENST00000583976 SCN3BQ9NY72 215 aa13.04□□□□□ -0.32
SKA2-209ENST00000583976 DIMT1Q9UNQ2 313 aaKnown RBP13.04□□□□□ -0.32
SKA2-209ENST00000583976 EXOSC1Q9Y3B2 195 aaKnown RBP13.04□□□□□ -0.32
SKA2-209ENST00000583976 A0A0U1RQV5 110 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 HTR1AP08908 422 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 PIPP12273 146 aaPredicted RBP13.03□□□□□ -0.32
SKA2-209ENST00000583976 MYL12AP19105 171 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 C21orf33P30042 268 aaPredicted RBP13.03□□□□□ -0.32
SKA2-209ENST00000583976 PMELP40967 661 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 GNB2P62879 340 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 DEFA6Q01524 100 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 OR2G6Q5TZ20 316 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 RUSC1-AS1Q66K80 236 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 C9orf139Q6ZV77 190 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 PRSS35Q8N3Z0 413 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 RNF166Q96A37 237 aaPredicted RBP13.03□□□□□ -0.32
SKA2-209ENST00000583976 MYCBPQ99417 103 aaPredicted RBP13.03□□□□□ -0.32
SKA2-209ENST00000583976 JAM3Q9BX67 310 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 TMEM165Q9HC07 324 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 TNFRSF19Q9NS68 423 aa13.03□□□□□ -0.32
SKA2-209ENST00000583976 CNOT2Q9NZN8 540 aaKnown RBP13.03□□□□□ -0.32
SKA2-209ENST00000583976 VWFP04275 2813 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms