RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 NDUFAF4Q9P032 175 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 VPREB3Q9UKI3 123 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 NOP16Q9Y3C1 178 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM96BQ9Y3D0 163 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 KPTNQ9Y664 436 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 KMT2CQ8NEZ4 4911 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 TVP23AA6NH52 213 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 RNASEK-C17orf49H0YIS7 233 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 BHLHE40O14503 412 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 ARPC3O15145 178 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 TSPAN9O75954 239 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 ECDO95905 644 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 LHBP01229 141 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 SELLP14151 372 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 SLC6A6P31641 620 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 PYCR1P32322 319 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 PRKXP51817 358 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 CSNK2BP67870 215 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 MXRA7P84157 204 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 PCK2Q16822 640 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 WDR38Q5JTN6 314 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 PNKDQ8N490 385 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 LY6G5BQ8NDX9 201 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 LRRC29Q8WV35 223 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 ZNRF4Q8WWF5 429 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 SPTSSAQ969W0 71 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 SEH1LQ96EE3 360 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 FUZQ9BT04 418 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 NSRP1Q9H0G5 558 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 PPA2Q9H2U2 334 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 AP3M1Q9Y2T2 418 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 SIGLEC9Q9Y336 463 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 CAB39Q9Y376 341 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM32AQ9Y421 112 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 N6AMT1Q9Y5N5 214 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 V9GYQ6 96 aa6.38□□□□□ -1.39
SMCHD1-210ENST00000583800 NOTCH3Q9UM47 2321 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM90A18PA6NE21 464 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM90A16PA6NEW6 464 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 ANKRD61A6NGH8 418 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM90A9PA6NNJ1 464 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM90A5PA8MXJ8 464 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 RAB27BO00194 218 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 ACOT8O14734 319 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 NPFFO15130 113 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 PIN1P1O15428 100 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 PSPNO60542 156 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 TFF1P04155 84 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM90A15PP0C7V4 464 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM90A14PP0C7W9 464 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 ZNF823P16415 610 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 GABRA5P31644 462 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 OTX1P32242 354 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 TGFBR2P37173 567 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 GMFBP60983 142 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 SPIBQ01892 262 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 HERPUD1Q15011 391 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 MICBQ29980 383 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 TMEM200BQ69YZ2 307 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 SLC35E4Q6ICL7 350 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 C8orf82Q6P1X6 216 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 METAP1DQ6UB28 335 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 DRAM2Q6UX65 266 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 Q6ZPA2 131 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 DCXRQ7Z4W1 244 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 ZDHHC21Q8IVQ6 265 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 C11orf53Q8IXP5 236 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 Q8N7P7 452 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 C11orf44Q8N8P7 122 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 SPERTQ8NA61 448 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 CYB561A3Q8NBI2 242 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 PROKR2Q8NFJ6 384 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 OR51L1Q8NGJ5 315 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 OR8S1Q8NH09 359 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 RP9Q8TA86 221 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 C7orf34Q96L11 122 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 KCTD14Q9BQ13 255 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 COPS4Q9BT78 406 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 DCTN5Q9BTE1 182 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 TOR3AQ9H497 397 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 PPP1R3EQ9H7J1 279 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 KCNG2Q9UJ96 466 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 PRPF19Q9UMS4 504 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 FOXJ3Q9UPW0 622 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 COMMD3-BMI1R4GMX3 469 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 RYR3Q15413 4870 aa6.37□□□□□ -1.39
SMCHD1-210ENST00000583800 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 LOC102723971A0A1B0GUV8 181 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 MEIOCA2RUB1 952 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 ANKRD30BLA7E2S9 258 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 H3BUX3 64 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 XRCC2O43543 280 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 NDUFB3O43676 98 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 GADD45GO95257 159 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 PAHP00439 452 aa6.36□□□□□ -1.39
SMCHD1-210ENST00000583800 OPN1MWP04001 364 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms