RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 FAM76BQ5HYJ3 339 aa13.75□□□□□ -0.21
SS18-211ENST00000578954 SPERTQ8NA61 448 aa13.75□□□□□ -0.21
SS18-211ENST00000578954 BORCS8Q96FH0 119 aa13.75□□□□□ -0.21
SS18-211ENST00000578954 CPNE2Q96FN4 548 aaPredicted RBP13.75□□□□□ -0.21
SS18-211ENST00000578954 ADAT1Q9BUB4 502 aaKnown RBP13.75□□□□□ -0.21
SS18-211ENST00000578954 TAAR3PQ9P1P4 343 aa13.75□□□□□ -0.21
SS18-211ENST00000578954 PKDREJQ9NTG1 2253 aa13.75□□□□□ -0.21
SS18-211ENST00000578954 A0A075B6Q4 140 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 IGKV1-27A0A075B6S5 117 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 ZSCAN5BA6NJL1 495 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 B9A039 149 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 PTBP3O95758 552 aaKnown RBP13.74□□□□□ -0.21
SS18-211ENST00000578954 ZNF93P35789 620 aaPredicted RBP13.74□□□□□ -0.21
SS18-211ENST00000578954 RBP2P50120 134 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 SCAND1P57086 179 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 ZP1P60852 638 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 GNG3P63215 75 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 KISS1Q15726 138 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 MST1LQ2TV78 715 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 NPRL2Q8WTW4 380 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 SORCS2Q96PQ0 1159 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 HIST1H2AAQ96QV6 131 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 MICU1Q9BPX6 476 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 MRI1Q9BV20 369 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 RTL8AQ9BWD3 113 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 ICE1Q9Y2F5 2266 aa13.74□□□□□ -0.21
SS18-211ENST00000578954 HELZ2Q9BYK8 2649 aaKnown RBP13.73□□□□□ -0.21
SS18-211ENST00000578954 RAI1Q7Z5J4 1906 aaPredicted RBP13.73□□□□□ -0.21
SS18-211ENST00000578954 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.73□□□□□ -0.21
SS18-211ENST00000578954 PLSCR5A0PG75 271 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 TMEM210A6NLX4 147 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 HS3ST1O14792 307 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 OCMP0CE72 109 aaPredicted RBP13.73□□□□□ -0.21
SS18-211ENST00000578954 CD200P41217 278 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 ALDH3B1P43353 468 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 RANBP1P43487 201 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 ATP1B3P54709 279 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 OR8G1Q15617 311 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 SWI5Q1ZZU3 235 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 ZNF404Q494X3 552 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 DMRTC1Q5HYR2 192 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 JAGN1Q8N5M9 183 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 TRMT10AQ8TBZ6 339 aaKnown RBP13.73□□□□□ -0.21
SS18-211ENST00000578954 ACOT12Q8WYK0 555 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 AP3S1Q92572 193 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 DVL3Q92997 716 aaPredicted RBP13.73□□□□□ -0.21
SS18-211ENST00000578954 FBXW5Q969U6 566 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 RNF170Q96K19 258 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 SPACA5Q96QH8 159 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 CNTD2Q9H8S5 307 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 MSL2Q9HCI7 577 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 ABRACLQ9P1F3 81 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 STEAP1Q9UHE8 339 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 COL12A1Q99715 3063 aa13.73□□□□□ -0.21
SS18-211ENST00000578954 FAM230AA0A1W2PPH8 454 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 ZNF732B4DXR9 585 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 H0YL77 283 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 M0R233 179 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 CALCBP10092 127 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 SLC2A2P11168 524 aaPredicted RBP13.72□□□□□ -0.21
SS18-211ENST00000578954 NAT2P11245 290 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 HTR2CP28335 458 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 MTCP1P56278 107 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 MZT1Q08AG7 82 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 RAB11BQ15907 218 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 NKPD1Q17RQ9 610 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 HES5Q5TA89 166 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 ASCL4Q6XD76 172 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 WDR86Q86TI4 376 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 DTX2Q86UW9 622 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 MUC15Q8N387 334 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 CELF2-AS1Q8N7Q2 184 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 OR4D6Q8NGJ1 314 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 OR8S1Q8NH09 359 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 GTF3AQ92664 365 aaKnown RBP13.72□□□□□ -0.21
SS18-211ENST00000578954 C1orf147Q96MC9 270 aaPredicted RBP13.72□□□□□ -0.21
SS18-211ENST00000578954 DIRC2Q96SL1 478 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 TLNRD1Q9H1K6 362 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 CXXC4Q9H2H0 198 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 MMP27Q9H306 513 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 OR51I2Q9H344 312 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 PLGRKTQ9HBL7 147 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 DAPK2Q9UIK4 370 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 ZDHHC8Q9ULC8 765 aa13.72□□□□□ -0.21
SS18-211ENST00000578954 A1L4Q6 167 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 LRP5LA4QPB2 252 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 CTAG2O75638 210 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 CD55P08174 381 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 MPZP25189 248 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 OR3A4PP47883 348 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 ZNF81P51508 661 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 GPM6AP51674 278 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 CAPZA1P52907 286 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 TLE4Q04727 773 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 MAB21L1Q13394 359 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 IDNKQ5T6J7 187 aa13.71□□□□□ -0.21
SS18-211ENST00000578954 SP5Q6BEB4 398 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms