RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 LIMS4P0CW20 117 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 EGR1P18146 543 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 DCKP27707 260 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 ETV1P50549 477 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 CCR9P51686 369 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 AQP4P55087 323 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 SEC61A1P61619 476 aaKnown RBP13.13□□□□□ -0.31
NCBP3-207ENST00000577169 GNG3P63215 75 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 LCN2P80188 198 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 ALKBH1Q13686 389 aaKnown RBP13.13□□□□□ -0.31
NCBP3-207ENST00000577169 CHRFAM7AQ494W8 412 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 CLVS2Q5SYC1 327 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 TMEM244Q5VVB8 128 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 PLCXD3Q63HM9 321 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 TMEM42Q69YG0 159 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 WDR82Q6UXN9 313 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 IL17RELQ6ZVW7 336 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 FBLIM1Q8WUP2 373 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 BEX2Q9BXY8 128 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 SHARPINQ9H0F6 387 aa13.13□□□□□ -0.31
NCBP3-207ENST00000577169 IGHV3OR15-7A0A075B7D8 119 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 IRGMA1A4Y4 181 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 DHRS7CA6NNS2 312 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
NCBP3-207ENST00000577169 FOXH1O75593 365 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 UBCP0CG48 685 aaKnown RBP13.12□□□□□ -0.31
NCBP3-207ENST00000577169 CFHR2P36980 270 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 GBX2P52951 348 aaPredicted RBP13.12□□□□□ -0.31
NCBP3-207ENST00000577169 FAHD2BQ6P2I3 314 aaPredicted RBP13.12□□□□□ -0.31
NCBP3-207ENST00000577169 CCDC54Q8NEL0 328 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 FAHD2AQ96GK7 314 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 TMEM80Q96HE8 168 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 JAM3Q9BX67 310 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 OR51I2Q9H344 312 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 CDC42EP3Q9UKI2 254 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 MTORP42345 2549 aa13.12□□□□□ -0.31
NCBP3-207ENST00000577169 TLN2Q9Y4G6 2542 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 TRAV38-1A0A0B4J264 116 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 LOC107986453A0A1B0GWG9 222 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 OOEPA6NGQ2 149 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 OR5B21A6NL26 309 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 OR4C45A6NMZ5 311 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 PHF1O43189 567 aaPredicted RBP13.11□□□□□ -0.31
NCBP3-207ENST00000577169 XPNPEP2O43895 674 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 ISG15P05161 165 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 RPS2P15880 293 aaKnown RBP13.11□□□□□ -0.31
NCBP3-207ENST00000577169 CPT2P23786 658 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 RIPK1Q13546 671 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 DCDC5Q6ZRR9 648 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 BPIFB6Q8NFQ5 453 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 OR10Z1Q8NGY1 313 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 SEH1LQ96EE3 360 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 NEIL1Q96FI4 390 aaPredicted RBP13.11□□□□□ -0.31
NCBP3-207ENST00000577169 PLCXD1Q9NUJ7 323 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 LPAR3Q9UBY5 353 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 CLEC2DQ9UHP7 191 aa13.11□□□□□ -0.31
NCBP3-207ENST00000577169 DIMT1Q9UNQ2 313 aaKnown RBP13.11□□□□□ -0.31
NCBP3-207ENST00000577169 CAB39Q9Y376 341 aaPredicted RBP13.11□□□□□ -0.31
NCBP3-207ENST00000577169 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.11□□□□□ -0.311e-10■■■□□ 17
NCBP3-207ENST00000577169 KIAA1324LA8MWY0 1029 aaPredicted RBP13.1□□□□□ -0.31
NCBP3-207ENST00000577169 SRRM5B3KS81 715 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 TRAPPC2LH3BP13 241 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 AKR7A2O43488 359 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 RHBDL1O75783 438 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 ATP6V1G2O95670 118 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 GYPAP02724 150 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 ZNF12P17014 697 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 PCMT1P22061 227 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 GTF2A1P52655 376 aaPredicted RBP13.1□□□□□ -0.31
NCBP3-207ENST00000577169 GMFBP60983 142 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 ST3GAL4Q11206 333 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 MRPL28Q13084 256 aaKnown RBP13.1□□□□□ -0.31
NCBP3-207ENST00000577169 UBE2V2Q15819 145 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 KCNJ8Q15842 424 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 ESCO2Q56NI9 601 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 OR2G6Q5TZ20 316 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 TEX36Q5VZQ5 186 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 FAM90A1Q86YD7 464 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 OR8B3Q8NGG8 313 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 OR10AC1Q8NH08 325 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 ZNF671Q8TAW3 534 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 FGGYQ96C11 551 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 OR8B2Q96RD0 313 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 PLEKHA1Q9HB21 404 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 TRIM36Q9NQ86 728 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 MMP26Q9NRE1 261 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 ERVK-18Q9QC07 812 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 PSORS1C1Q9UIG5 152 aa13.1□□□□□ -0.31
NCBP3-207ENST00000577169 POLR3KQ9Y2Y1 108 aaPredicted RBP13.1□□□□□ -0.31
NCBP3-207ENST00000577169 EXOSC1Q9Y3B2 195 aaKnown RBP13.1□□□□□ -0.31
NCBP3-207ENST00000577169 PQLC2LA1A4F0 135 aa13.09□□□□□ -0.31
NCBP3-207ENST00000577169 EFCAB10A6NFE3 127 aa13.09□□□□□ -0.31
NCBP3-207ENST00000577169 ANKRD61A6NGH8 418 aa13.09□□□□□ -0.31
NCBP3-207ENST00000577169 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.09□□□□□ -0.31
NCBP3-207ENST00000577169 ADAM20O43506 726 aa13.09□□□□□ -0.31
NCBP3-207ENST00000577169 NDUFA2O43678 99 aa13.09□□□□□ -0.31
NCBP3-207ENST00000577169 SERPINA3P01011 423 aa13.09□□□□□ -0.31
NCBP3-207ENST00000577169 HNF1AP20823 631 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms