RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 GLRA1P23415 457 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 RRM2P31350 389 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 CAPZA1P52907 286 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 CRMP1Q14194 572 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 HABP2Q14520 560 aaPredicted RBP9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 KLHL12Q53G59 568 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 ARSJQ5FYB0 599 aaPredicted RBP9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 CGB2Q6NT52 195 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 PRSS45Q7RTY3 260 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 HDXQ7Z353 690 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 TIGD4Q8IY51 512 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 MKXQ8IYA7 352 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 Q8N2B8 174 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNRF1Q8ND25 227 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR5K1Q8NHB7 308 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 PGAM5Q96HS1 289 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 PYURFQ96I23 114 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 RNF170Q96K19 258 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 HIST1H2AAQ96QV6 131 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF702PQ9H963 129 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 ELL3Q9HB65 397 aaPredicted RBP9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 TBC1D23Q9NUY8 699 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 IL20Q9NYY1 176 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 DNAJC27Q9NZQ0 273 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 PITPNC1Q9UKF7 332 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 IGKV1D-17A0A075B6S4 117 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 VGLL3A8MV65 326 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 CCDC22O60826 627 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 CST4P01036 141 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 SEMG1P04279 462 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 ALDOBP05062 364 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 FABP3P05413 133 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 SPI1P17947 270 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 PAX6P26367 422 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 SLC25A1P53007 311 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 PSME3P61289 254 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 CNN3Q15417 329 aaKnown RBP9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 FAM76BQ5HYJ3 339 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZDHHC23Q8IYP9 409 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 LINC00471Q8N535 108 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 PIFOQ8TCI5 191 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 RNF133Q8WVZ7 376 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 PIGCQ92535 297 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 FOXRED1Q96CU9 486 aaPredicted RBP9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 ABHD6Q9BV23 337 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 PRSS22Q9GZN4 317 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 GORASP2Q9H8Y8 452 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 VIPAS39Q9H9C1 493 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 BRD7Q9NPI1 651 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 ABCB10Q9NRK6 738 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 C19orf12Q9NSK7 152 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 USE1Q9NZ43 259 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 BAIAP2Q9UQB8 552 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 TCF19Q9Y242 345 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 DNAH3Q8TD57 4116 aa9.43□□□□□ -0.9
CTDNEP1-212ENST00000576613 ADARB2-AS1A8MUL3 147 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 KRT36O76013 467 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 IFNGP01579 166 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 H2BFMP0C1H6 154 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 PF4V1P10720 104 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 PSG2P11465 335 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 IGLL1P15814 213 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 COX7A1P24310 79 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 DCTDP32321 178 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 ERVFRD-1P60508 538 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 RPL31P62899 125 aaKnown RBP9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 THAP5Q7Z6K1 395 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 ERI1Q8IV48 349 aaKnown RBP9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 WFDC9Q8NEX5 89 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR6N2Q8NGY6 317 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 RPS4Y2Q8TD47 263 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 HPSE2Q8WWQ2 592 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 SDSLQ96GA7 329 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 INTS14Q96SY0 518 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 NMNAT2Q9BZQ4 307 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF319Q9P2F9 582 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 MAGEL2Q9UJ55 1249 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF222Q9UK12 451 aa9.42□□□□□ -0.9
CTDNEP1-212ENST00000576613 MEGF11A6BM72 1044 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 RIIAD1A6NNX1 92 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 SLC1A7O00341 560 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 RHBDL1O75783 438 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 CLUP10909 449 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF3P17036 446 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 ACKR3P25106 362 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 OPRL1P41146 370 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 GPM6AP51674 278 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 GNG3P63215 75 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 SLC35A2P78381 396 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 SMIM21Q3B7S5 101 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 PLA1AQ53H76 456 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 SAMD4BQ5PRF9 694 aaKnown RBP9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 C11orf87Q6NUJ2 197 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 RASSF6Q6ZTQ3 369 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 SHFQ7M4L6 423 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 RNF148Q8N7C7 305 aa9.41□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR2T33Q8NG76 320 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms