RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 ART1P52961 327 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 SNTB1Q13884 538 aaKnown RBP11.71□□□□□ -0.53
CCDC40-209ENST00000573474 ALKBH6Q3KRA9 238 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 AWAT2Q6E213 333 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 CNIH2Q6PI25 160 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 CRIP3Q6Q6R5 217 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 SLC22A25Q6T423 547 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.53
CCDC40-209ENST00000573474 GLIPR1L1Q6UWM5 242 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 OR8G5Q8NG78 346 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 RAB40AQ8WXH6 277 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 PTX4Q96A99 478 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 PLPPR2Q96GM1 343 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 SLC22A4Q9H015 551 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 TMEM100Q9NV29 134 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 GHRLQ9UBU3 117 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 FZR1Q9UM11 496 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 ATP23Q9Y6H3 246 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 ZFYVE26Q68DK2 2539 aa11.71□□□□□ -0.53
CCDC40-209ENST00000573474 IGKV1-27A0A075B6S5 117 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 TMEM272A0A1B0GTI8 110 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 FABP12A6NFH5 140 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 OR5B21A6NL26 309 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 VSTM5A8MXK1 200 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 LDLRAD4O15165 306 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 IGHV3-13P01766 116 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 CD3EP07766 207 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 NAT2P11245 290 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 PTBP1P26599 531 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCDC40-209ENST00000573474 TALDO1P37837 337 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 ALDH3B1P43353 468 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 SELENOVP59797 346 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 ZP1P60852 638 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 BEX5Q5H9J7 111 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 TMEM255AQ5JRV8 349 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 VHLLQ6RSH7 139 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 CMTM4Q8IZR5 234 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 TNFAIP8L1Q8WVP5 186 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 HPSE2Q8WWQ2 592 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 RFT1Q96AA3 541 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 ITPKCQ96DU7 683 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 SLC25A38Q96DW6 304 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 S100A16Q96FQ6 103 aaKnown RBP11.7□□□□□ -0.54
CCDC40-209ENST00000573474 RNF170Q96K19 258 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 S100A13Q99584 98 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 MICU1Q9BPX6 476 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 ABCG5Q9H222 651 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 ZNF442Q9H7R0 627 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 NPDC1Q9NQX5 325 aaPredicted RBP11.7□□□□□ -0.54
CCDC40-209ENST00000573474 RHBDL2Q9NX52 303 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 EXTL2Q9UBQ6 330 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 DUSP13Q9UII6 198 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 RAB22AQ9UL26 194 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 ING4Q9UNL4 249 aa11.7□□□□□ -0.54
CCDC40-209ENST00000573474 IGLV3-9A0A075B6K5 115 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 ZNF732B4DXR9 585 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 TMEM225BP0DP42 221 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 RAB6AP20340 208 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 CD40LGP29965 261 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 MMP15P51511 669 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 GPM6AP51674 278 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 PPP5CP53041 499 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 KLF3P57682 345 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-209ENST00000573474 GNG3P63215 75 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 QRFPP83859 136 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 OR8G1Q15617 311 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 MSMPQ1L6U9 139 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 FAM131AQ6UXB0 335 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 OR2W3Q7Z3T1 314 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 SPERTQ8NA61 448 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 OR4M1Q8NGD0 313 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 OR13G1Q8NGZ3 307 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 OR8S1Q8NH09 359 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 ZFAND2BQ8WV99 257 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 RTL8AQ9BWD3 113 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 FGF23Q9GZV9 251 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-209ENST00000573474 KCNK15Q9H427 330 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 CA10Q9NS85 328 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 RABL2AQ9UBK7 228 aaPredicted RBP11.69□□□□□ -0.54
CCDC40-209ENST00000573474 RABL2BQ9UNT1 228 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 V9GYH0 126 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 HIVEP3Q5T1R4 2406 aa11.69□□□□□ -0.54
CCDC40-209ENST00000573474 DIDO1Q9BTC0 2240 aaKnown RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 HEATR1Q9H583 2144 aaKnown RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
CCDC40-209ENST00000573474 A0A1B0GWJ7 208 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 VSIG8P0DPA2 414 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 KIR2DL3P43628 341 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 EFNB2P52799 333 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 PLA2G7Q13093 441 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 PDZK1IP1Q13113 114 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 ASCL4Q6XD76 172 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 C1QL2Q7Z5L3 287 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 LRP11Q86VZ4 500 aa11.68□□□□□ -0.54
CCDC40-209ENST00000573474 ZNF573Q86YE8 665 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms