RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 AKR1C4P17516 323 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 CHRNB4P30926 498 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 TNFAIP6P98066 277 aaPredicted RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 NSUN5P2Q63ZY6 315 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 FAM122BQ7Z309 247 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 TECTBQ96PL2 329 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 FRRS1LQ9P0K9 344 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 CYB5R1Q9UHQ9 305 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 KLHDC2Q9Y2U9 406 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 MEMO1Q9Y316 297 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 SIRPB1O00241 398 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 RLN2P04090 185 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 WT1P19544 449 aaPredicted RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 KLK2P20151 261 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 DUSP1P28562 367 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 AP2S1P53680 142 aaPredicted RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 EIF5AP63241 154 aaKnown RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 MFGE8Q08431 387 aaPredicted RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 C2orf76Q3KRA6 126 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 C1QTNF12Q5T7M4 302 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 SSX8Q7RTT4 187 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 DVL3Q92997 716 aaPredicted RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 OR2J1Q9GZK6 312 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 UBTD1Q9HAC8 227 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 EHFQ9NZC4 300 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 ST3GAL6Q9Y274 331 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 MAB21L2Q9Y586 359 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 HEATR5AQ86XA9 2040 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 USF3Q68DE3 2245 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 PTAFRP25105 342 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 GSK3AP49840 483 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 FAM27E3Q08E93 113 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 FOXO1Q12778 655 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 KISS1Q15726 138 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 ADAM5Q6NVV9 412 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 CMTM1Q8IZ96 169 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 SPAG16Q8N0X2 631 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 ABHD5Q8WTS1 349 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 GSKIPQ9P0R6 139 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 ANKRD11Q6UB99 2663 aaPredicted RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 CACNA1DQ01668 2161 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 HEATR1Q9H583 2144 aaKnown RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 FXYD6-FXYD2A0A087WZ82 144 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 OR4C45A6NMZ5 311 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 LYRM1O43325 122 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 SNAPC5O75971 98 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 AKAIN1P0CW23 69 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 ZNF133P52736 654 aaPredicted RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 SNTB1Q13884 538 aaKnown RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 SSX1Q16384 188 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 SMIM21Q3B7S5 101 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 FXYD6Q9H0Q3 95 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 FN3KRPQ9HA64 309 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 MRPL22Q9NWU5 206 aaKnown RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 CEP192Q8TEP8 1941 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 hCG_1809904A0A1W2PP81 198 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 A0A1W2PPE2 198 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 A0A1W2PR64 198 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 A0A1W2PRV1 198 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 HOXB1P14653 301 aaPredicted RBP8.84□□□□□ -0.99
SMG6-213ENST00000573166 MGMTP16455 207 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 DMKNQ6E0U4 476 aaPredicted RBP8.84□□□□□ -0.99
SMG6-213ENST00000573166 NLRC3Q7RTR2 1065 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 OR10AD1Q8NGE0 317 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 S100PBPQ96BU1 408 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 AMELYQ99218 206 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 OR10A4Q9H209 315 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 RANBP3Q9H6Z4 567 aaPredicted RBP8.84□□□□□ -0.99
SMG6-213ENST00000573166 MLXQ9UH92 298 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 FOXJ3Q9UPW0 622 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 STARD10Q9Y365 291 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 PLXND1Q9Y4D7 1925 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 TRAV1-2A0A0B4J238 106 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 ANKRD34BA5PLL1 514 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 TRIM64A6NGJ6 449 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 SLC17A2O00624 439 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 SCGB1D2O95969 90 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 EPXP11678 715 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 TAS2R19P59542 299 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 TNK1Q13470 666 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 HLXQ14774 488 aaPredicted RBP8.84□□□□□ -0.99
SMG6-213ENST00000573166 INO80EQ8NBZ0 244 aaPredicted RBP8.84□□□□□ -0.99
SMG6-213ENST00000573166 OR4M1Q8NGD0 313 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 RAB1BQ9H0U4 201 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 C11orf54Q9H0W9 315 aaPredicted RBP8.84□□□□□ -0.99
SMG6-213ENST00000573166 MSL2Q9HCI7 577 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 MPC1Q9Y5U8 109 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 ATRXP46100 2492 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 KANTRA0A1W2PQU2 76 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 ZSCAN5BA6NJL1 495 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 OR5H1A6NKK0 313 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 H2AFB2P0C5Z0 115 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 DNASE1P24855 282 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 FGF9P31371 208 aaPredicted RBP8.84□□□□□ -0.99
SMG6-213ENST00000573166 AKR1C2P52895 323 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 GAS1P54826 345 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 DEFA5Q01523 94 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 GGTLC2Q14390 218 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 HFEQ30201 348 aa8.84□□□□□ -0.99
SMG6-213ENST00000573166 OR10AC1Q8NH08 325 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms