RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 TSPAN31Q12999 210 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 EIF2B1Q14232 305 aaKnown RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 CNN3Q15417 329 aaKnown RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 C8orf82Q6P1X6 216 aaPredicted RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 PRSS45Q7RTY3 260 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 FTMTQ8N4E7 242 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 PAPD5Q8NDF8 572 aaKnown RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 WFDC9Q8NEX5 89 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 OR52L1Q8NGH7 329 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 OR6K6Q8NGW6 343 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 RP9Q8TA86 221 aaKnown RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 HPSE2Q8WWQ2 592 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 OR5P3Q8WZ94 311 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 HOPXQ9BPY8 73 aaPredicted RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 WNT10AQ9GZT5 417 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 HEXA-AS1Q9H8Q6 139 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 DCAF13Q9NV06 445 aaKnown RBP16.03■□□□□ 0.16
CCDC40-206ENST00000572083 ZNF222Q9UK12 451 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 TCF19Q9Y242 345 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 MPC1Q9Y5U8 109 aa16.03■□□□□ 0.16
CCDC40-206ENST00000572083 PF4V1P10720 104 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 CLUP10909 449 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 COX4I1P13073 169 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 SMIM11AP58511 58 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 KRTAP10-11P60412 298 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 GLYATQ6IB77 296 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 Q6ZS46 218 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 OR52H1Q8NGJ2 320 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 GNPDA2Q8TDQ7 276 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 PIGCQ92535 297 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 RNF170Q96K19 258 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 WWC2-AS2Q96NR7 200 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 PRSS22Q9GZN4 317 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 OR10A2Q9H208 303 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 SP140LQ9H930 580 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 CD300AQ9UGN4 299 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 CDH10Q9Y6N8 788 aa16.02■□□□□ 0.16
CCDC40-206ENST00000572083 VGLL3A8MV65 326 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 GLCEO94923 617 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 FAHP16930 419 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 SPI1P17947 270 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 PAICSP22234 425 aaKnown RBP16.01■□□□□ 0.15
CCDC40-206ENST00000572083 DCTDP32321 178 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 IFNGR2P38484 337 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 CD69Q07108 199 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 CRMP1Q14194 572 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 SNCBQ16143 134 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 TEX30Q5JUR7 227 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 ZNF782Q6ZMW2 699 aaPredicted RBP16.01■□□□□ 0.15
CCDC40-206ENST00000572083 LINC00471Q8N535 108 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 OR8D4Q8NGM9 314 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 OR5K1Q8NHB7 308 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 PGAM5Q96HS1 289 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 YY1AP1Q9H869 796 aa16.01■□□□□ 0.15
CCDC40-206ENST00000572083 A6NDX4 124 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 SLC22A2O15244 555 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 SEMG1P04279 462 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 CCL3L1P16619 93 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 RRM2P31350 389 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 VDAC2P45880 294 aaPredicted RBP16■□□□□ 0.15
CCDC40-206ENST00000572083 NUDT2P50583 147 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 GPM6AP51674 278 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 RPL31P62899 125 aaKnown RBP16■□□□□ 0.15
CCDC40-206ENST00000572083 FAM76BQ5HYJ3 339 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 TIGD4Q8IY51 512 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 ZDHHC23Q8IYP9 409 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 C11orf42Q8N5U0 333 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 RNF133Q8WVZ7 376 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 AMELYQ99218 206 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 ABCB10Q9NRK6 738 aa16■□□□□ 0.15
CCDC40-206ENST00000572083 PF4P02776 101 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 SLC35A2P78381 396 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 TMEM200BQ69YZ2 307 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 THAP5Q7Z6K1 395 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 OR4M1Q8NGD0 313 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 OR6N2Q8NGY6 317 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 RPS4Y2Q8TD47 263 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 SDSLQ96GA7 329 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 ABHD6Q9BV23 337 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 NMNAT2Q9BZQ4 307 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 MUC13Q9H3R2 512 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 ABCB9Q9NP78 766 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 ABCD2Q9UBJ2 740 aa15.99■□□□□ 0.15
CCDC40-206ENST00000572083 A0A1W2PPH5 198 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 FAM90A8PA6NJQ4 464 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 CST4P01036 141 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 APOC1P02654 83 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 BLCAPP62952 87 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 CD83Q01151 205 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 ZNF273Q14593 569 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 DMRTC1Q5HYR2 192 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 RPL13AP3Q6NVV1 102 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 ERI1Q8IV48 349 aaKnown RBP15.98■□□□□ 0.15
CCDC40-206ENST00000572083 RNF148Q8N7C7 305 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 OR5AU1Q8NGC0 362 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 OR9Q2Q8NGE9 314 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 PYURFQ96I23 114 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 LYZL4Q96KX0 146 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 RGCCQ9H4X1 137 aa15.98■□□□□ 0.15
CCDC40-206ENST00000572083 EFCAB1Q9HAE3 211 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms