RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SLC35A2P78381 396 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 SLC3A1Q07837 685 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 RIPPLY1Q0D2K3 151 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 OR8B8Q15620 311 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 KCTD8Q6ZWB6 473 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 OR10AC1Q8NH08 325 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 OR52N1Q8NH53 320 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 OR5AK2Q8NH90 309 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 CCL17Q92583 94 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 YIPF5Q969M3 257 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 TMEM186Q96B77 213 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 MEGF10Q96KG7 1140 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 HIST1H2AAQ96QV6 131 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 PDCD1LG2Q9BQ51 273 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 SUCNR1Q9BXA5 334 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 PLEKHA1Q9HB21 404 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 LPAR2Q9HBW0 351 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 UFSP2Q9NUQ7 469 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 NKIRAS2Q9NYR9 191 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 MRPL15Q9P015 296 aaKnown RBP11.22□□□□□ -0.61
CCDC40-205ENST00000571028 BLOC1S6Q9UL45 172 aa11.22□□□□□ -0.61
CCDC40-205ENST00000571028 ARFGEF3Q5TH69 2177 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.21□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF816-ZNF321PA0A0X1KG74 233 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 A6NLC8 198 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 ANXA2P2A6NMY6 339 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 OR4C45A6NMZ5 311 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 LALBAP00709 142 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 UBCP0CG48 685 aaKnown RBP11.21□□□□□ -0.61
CCDC40-205ENST00000571028 TNFRSF1AP19438 455 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 SRP9P49458 86 aaKnown RBP11.21□□□□□ -0.61
CCDC40-205ENST00000571028 WNT4P56705 351 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 MED22Q15528 200 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 CEP78Q5JTW2 689 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 FAM209AQ5JX71 171 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 TMEM244Q5VVB8 128 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 PLCXD3Q63HM9 321 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 FDX2Q6P4F2 183 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 TREML4Q6UXN2 200 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 MOGAT3Q86VF5 341 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 FTMTQ8N4E7 242 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 NANOGP1Q8N7R0 232 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 OR13C3Q8NGS6 347 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 OR14K1Q8NGZ2 314 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF420Q8TAQ5 688 aaPredicted RBP11.21□□□□□ -0.61
CCDC40-205ENST00000571028 OR5M11Q96RB7 305 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF747Q9BV97 191 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 SLC22A4Q9H015 551 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 DUSP21Q9H596 190 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 TRIM36Q9NQ86 728 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 GPR173Q9NS66 373 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 ZNF275Q9NSD4 429 aaPredicted RBP11.21□□□□□ -0.61
CCDC40-205ENST00000571028 ENPP5Q9UJA9 477 aa11.21□□□□□ -0.61
CCDC40-205ENST00000571028 SIRT4Q9Y6E7 314 aaPredicted RBP11.21□□□□□ -0.61
CCDC40-205ENST00000571028 PPIHO43447 177 aaKnown RBP11.2□□□□□ -0.62
CCDC40-205ENST00000571028 GMDSO60547 372 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 ZFPL1O95159 310 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 IGLV3-1P01715 115 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 CD55P08174 381 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 ADH4P08319 380 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 HSMCR30P0CW71 290 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 ATP6V1B1P15313 513 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 ZNF20P17024 532 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 TGM4P49221 684 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 CCR9P51686 369 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 MRPL28Q13084 256 aaKnown RBP11.2□□□□□ -0.62
CCDC40-205ENST00000571028 MAB21L1Q13394 359 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 HFEQ30201 348 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 AVPI1Q5T686 147 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 FAHD2BQ6P2I3 314 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-205ENST00000571028 RPL22L1Q6P5R6 122 aaKnown RBP11.2□□□□□ -0.62
CCDC40-205ENST00000571028 BOLLQ8N9W6 283 aaKnown RBP11.2□□□□□ -0.62
CCDC40-205ENST00000571028 OR51A4Q8NGJ6 313 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 OR51F2Q8NH61 342 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 NPRL2Q8WTW4 380 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 TSEN15Q8WW01 171 aaKnown RBP11.2□□□□□ -0.62
CCDC40-205ENST00000571028 FGGYQ96C11 551 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 FAHD2AQ96GK7 314 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 RNF170Q96K19 258 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 MND1Q9BWT6 205 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 CDCA4Q9BXL8 241 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 NARFLQ9H6Q4 476 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 DCAF16Q9NXF7 216 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 IL19Q9UHD0 177 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 HHLA2Q9UM44 414 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 PPP1R3CQ9UQK1 317 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 NOP16Q9Y3C1 178 aaKnown RBP11.2□□□□□ -0.62
CCDC40-205ENST00000571028 V9GYS6 101 aa11.2□□□□□ -0.62
CCDC40-205ENST00000571028 TMEM212A6NML5 194 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 CST4P01036 141 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 NRASP01111 189 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 MSMBP08118 114 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 ACHEP22303 614 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 CCL1P22362 96 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 CRYBB2P43320 205 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 GPR6P46095 362 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-205ENST00000571028 SOX2P48431 317 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 GPM6AP51674 278 aa11.19□□□□□ -0.62
CCDC40-205ENST00000571028 FOXL1Q12952 345 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms