RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 NPIPA2E9PIF3 369 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 C11orf98E9PRG8 122 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 J3QRE1 110 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 CCRL2O00421 344 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 GPR171O14626 319 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 ARHGEF9O43307 516 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 EFNA2O43921 213 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF24P17028 368 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 PSMA1P25786 263 aaKnown RBP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 PSMB9P28065 219 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 P2RY4P51582 365 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 GBX2P52951 348 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 CLDN17P56750 224 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 CARD18P57730 90 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 PPIAP62937 165 aaKnown RBP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 GLO1Q04760 184 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 RELQ04864 619 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 MLLT11Q13015 90 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 GPR50Q13585 617 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 SLC10A1Q14973 349 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 OPCMLQ14982 345 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 SF3B4Q15427 424 aaKnown RBP eCLIP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 SPHARQ15513 63 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 TAF13Q15543 124 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 TRAM1Q15629 374 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 SRSF7Q16629 238 aaKnown RBP eCLIP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 MS4A18Q3C1V0 323 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 THEM4Q5T1C6 240 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 HBMQ6B0K9 141 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 GDPGP1Q6ZNW5 385 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 YRDCQ86U90 279 aaKnown RBP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 P2RY8Q86VZ1 359 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 SYS1Q8N2H4 156 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 TMEM251Q8N6I4 163 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 ATP6V1C2Q8NEY4 427 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 OR51G2Q8NGK0 314 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 OR1J1Q8NGS3 322 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 SLC25A44Q96H78 314 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 ADGRG7Q96K78 797 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 RBP7Q96R05 134 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 TAAR6Q96RI8 345 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 NMNAT3Q96T66 252 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 DOK1Q99704 481 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 YIPF3Q9GZM5 350 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 OR51V1Q9H2C8 321 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 TMEM185BQ9H7F4 350 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 MARCH7Q9H992 704 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 RNF122Q9H9V4 155 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 EMC3Q9P0I2 261 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 MALT1Q9UDY8 824 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 KCNG2Q9UJ96 466 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 LAMP5Q9UJQ1 280 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 MCTS1Q9ULC4 181 aaKnown RBP6.08□□□□□ -1.44
CNOT1-222ENST00000570139 KCNS2Q9ULS6 477 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 NSG2Q9Y328 171 aa6.08□□□□□ -1.44
CNOT1-222ENST00000570139 DOCK10Q96BY6 2186 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 PINLYPA6NC86 204 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF726A6NNF4 738 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 C12orf71A8MTZ7 269 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 B8ZZF3 427 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF670-ZNF695F2Z2N8 137 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 K7ENP7 123 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 TFECO14948 347 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-222ENST00000570139 SLC22A1O15245 554 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 TRAF3IP2O43734 574 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-222ENST00000570139 KHDRBS3O75525 346 aaKnown RBP6.07□□□□□ -1.44
CNOT1-222ENST00000570139 GABARAPO95166 117 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 SYNGR4O95473 234 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 IGHG3P01860 377 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 PRSS2P07478 247 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 YES1P07947 543 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 TACSTD2P09758 323 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 CALCBP10092 127 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 CPN1P15169 458 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF708P17019 499 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 GALP22466 123 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 CDKN2AP42771 156 aaKnown RBP6.07□□□□□ -1.44
CNOT1-222ENST00000570139 MAGEA5P43359 124 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 LHX2P50458 406 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 BRWD1-AS2P59051 145 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 STK11Q15831 433 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF544Q6NX49 715 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 CHMP1BQ7LBR1 199 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 FAM220AQ7Z4H9 259 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 RTN4RL2Q86UN3 420 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 CLVS1Q8IUQ0 354 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-222ENST00000570139 CYB561A3Q8NBI2 242 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF114Q8NC26 417 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 NOXO1Q8NFA2 376 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 BBS1Q8NFJ9 593 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 OR5M1Q8NGP8 315 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 OR6K6Q8NGW6 343 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 OR52N5Q8NH56 324 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 NEIL3Q8TAT5 605 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ASB17Q8WXJ9 295 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 UFD1Q92890 307 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ISOC1Q96CN7 298 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 MGLLQ99685 303 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 RHNO1Q9BSD3 238 aa6.07□□□□□ -1.44
CNOT1-222ENST00000570139 ZNF416Q9BWM5 594 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms