RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SLC2A8Q9NY64 477 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 TRBV5-7A0A0A0MS05 114 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 A8MVM7 634 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 LCATP04180 440 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 ZNF25P17030 456 aaPredicted RBP9.7□□□□□ -0.86
PALB2-206ENST00000568219 DAP3P51398 398 aaKnown RBP9.7□□□□□ -0.86
PALB2-206ENST00000568219 SCAND1P57086 179 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 NPSR1Q6W5P4 371 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 ZNF66Q6ZN08 573 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 RTN4RL2Q86UN3 420 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 PLEKHA2Q9HB19 425 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 PARP11Q9NR21 331 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 RALGAPA2Q2PPJ7 1873 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 CASP8AP2Q9UKL3 1982 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 OR5H15A6NDH6 313 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 OR5H1A6NKK0 313 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 NKX2-1P43699 371 aaPredicted RBP9.7□□□□□ -0.86
PALB2-206ENST00000568219 PCK2Q16822 640 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 ZNF260Q3ZCT1 412 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 FAM69BQ5VUD6 431 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 LYZL2Q7Z4W2 148 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 COMMD1Q8N668 190 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 DAZLQ92904 295 aaKnown RBP9.7□□□□□ -0.86
PALB2-206ENST00000568219 ERGIC1Q969X5 290 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 ANKRD9Q96BM1 317 aaPredicted RBP9.7□□□□□ -0.86
PALB2-206ENST00000568219 HDHD3Q9BSH5 251 aaPredicted RBP9.7□□□□□ -0.86
PALB2-206ENST00000568219 NKX2-4Q9H2Z4 354 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 CACFD1Q9UGQ2 172 aa9.7□□□□□ -0.86
PALB2-206ENST00000568219 CCDC187A0A096LP49 1063 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 LOC101059948A0A1B0GTJ6 334 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 BPNT1O95861 308 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 OR5AC1P0C628 307 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 FAHP16930 419 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 FPR2P25090 351 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 GPX4P36969 197 aaPredicted RBP9.69□□□□□ -0.86
PALB2-206ENST00000568219 ZNF266Q14584 549 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 ZNF124Q15973 351 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 Q7L0L9 218 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 ZNF321PQ8N8H1 164 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 RPS4Y2Q8TD47 263 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 LMX1AQ8TE12 382 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 IL1F10Q8WWZ1 152 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 C11orf40Q8WZ69 217 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 TVP23CQ96ET8 276 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 LIN37Q96GY3 246 aaPredicted RBP9.69□□□□□ -0.86
PALB2-206ENST00000568219 SLC26A1Q9H2B4 701 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 DNAJB11Q9UBS4 358 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 IL17BQ9UHF5 180 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 ICAM5Q9UMF0 924 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 SCN8AQ9UQD0 1980 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 A0A1B0GTI1 187 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 RBFOX3A6NFN3 312 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 PPP5D1E7EU14 171 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 CYR61O00622 381 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 RER1O15258 196 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 CD79AP11912 226 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 GABREP78334 506 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 CDCP2Q5VXM1 449 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 BIVMQ86UB2 503 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 GPR137CQ8N3F9 429 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 BAHD1Q8TBE0 780 aaPredicted RBP9.69□□□□□ -0.86
PALB2-206ENST00000568219 WFIKKN1Q96NZ8 548 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 UTP23Q9BRU9 249 aaKnown RBP9.69□□□□□ -0.86
PALB2-206ENST00000568219 ZDHHC8Q9ULC8 765 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 PAPPA2Q9BXP8 1791 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 NSG1A0A0A6YYJ2 146 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 A0A1W2PNR3 127 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 UBE2CO00762 179 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 CT45A8P0DMV1 189 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 CT45A9P0DMV2 189 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 FGF8P55075 233 aaPredicted RBP9.69□□□□□ -0.86
PALB2-206ENST00000568219 ZNF117Q03924 483 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 CT45A2Q5DJT8 189 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 PYY3Q5JQD4 70 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 LFNGQ8NES3 379 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 FAAP24Q9BTP7 215 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 MFRPQ9BY79 579 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 S1PR5Q9H228 398 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 SUSD2Q9UGT4 822 aa9.69□□□□□ -0.86
PALB2-206ENST00000568219 AHCTF1Q8WYP5 2266 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 RAMP1O60894 148 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 GUSBP08236 651 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 CDX1P47902 265 aaPredicted RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 P2RY4P51582 365 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 POLR2HP52434 150 aaKnown RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 ZNF121P58317 390 aaPredicted RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 INSM1Q01101 510 aaPredicted RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 TLE4Q04727 773 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 NOGQ13253 232 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 CYB561D1Q8N8Q1 229 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 RBMXL1Q96E39 390 aaKnown RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 BORCS8Q96FH0 119 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 VSTM2LQ96N03 204 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 PLK3Q9H4B4 646 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 BCO1Q9HAY6 547 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 GPR173Q9NS66 373 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 CA14Q9ULX7 337 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 HKR1P10072 659 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 ERGP11308 486 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms