RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 GLYATL2Q8WU03 294 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 RAB1CQ92928 201 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TMBIM1Q969X1 311 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 MRGPRFQ96AM1 343 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 EXOSC8Q96B26 276 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PGLYRP4Q96LB8 373 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CNBD2Q96M20 576 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CDX2Q99626 313 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 NAPGQ99747 312 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PRRT1Q99946 306 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 OMDQ99983 421 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 MED18Q9BUE0 208 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 DDA1Q9BW61 102 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 MROQ9BYG7 248 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 NXF2Q9GZY0 626 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 COA1Q9GZY4 146 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CLMPQ9H6B4 373 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 KIR3DX1Q9H7L2 352 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 METTL7AQ9H8H3 244 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TMBIM4Q9HC24 238 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ANKHQ9HCJ1 492 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 APMAPQ9HDC9 416 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 CCNB1IP1Q9NPC3 277 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 TMEM138Q9NPI0 162 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF302Q9NR11 478 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 DYRK4Q9NR20 520 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 NRBP2Q9NSY0 501 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 MCUBQ9NWR8 336 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 GLTPQ9NZD2 209 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 BFARQ9NZS9 450 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PDP1Q9P0J1 537 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ENPP5Q9UJA9 477 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 NPIPA1Q9UND3 350 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 COPS3Q9UNS2 423 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SLC22A13Q9Y226 551 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 POFUT2Q9Y2G5 429 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 GOLT1BQ9Y3E0 138 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SLC22A7Q9Y694 548 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SLCO1B1Q9Y6L6 691 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 XIRP2A4UGR9 3374 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 FANCMQ8IYD8 2048 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PTPRSQ13332 1948 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 ATG2AQ2TAZ0 1938 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 C5orf42Q9H799 3197 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 SIPA1L1O43166 1804 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 LRRC37A2A6NM11 1700 aa2.42□□□□□ -2.02
HERPUD1-212ENST00000567944 PLXNA3P51805 1871 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 KMT2EQ8IZD2 1858 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 USP24Q9UPU5 2620 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 COL11A1P12107 1806 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 IGKV1D-8A0A087WSZ0 117 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 CCL15-CCL14A0A0B4J2E2 113 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 LINC00862A6NCI5 91 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 SERPINE3A8MV23 424 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 K7EQM0 130 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 PSMD12O00232 456 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 RGS5O15539 181 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 RAD1O60671 282 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 CTNSO60931 367 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 SCN2BO60939 215 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 FKBP6O75344 327 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 MED6O75586 246 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 GATBO75879 557 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 VAPBO95292 243 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 FADS2O95864 444 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 PTTG1O95997 202 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 IFNA21P01568 189 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 UGT2B4P06133 528 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 CCL2P13500 99 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 ADRB3P13945 408 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 GTF2F2P13984 249 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 UCHL3P15374 230 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 NQO2P16083 231 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF32P17041 273 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 RCC1P18754 421 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 SRMP19623 302 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 STOMP27105 288 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 SDC4P31431 198 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 MAS1LP35410 378 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 ATP5C1P36542 298 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 RFC3P40938 356 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 PTGDSP41222 190 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 RPS10P46783 165 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 QARSP47897 775 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 PSMD8P48556 350 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 RGS4P49798 205 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 RBP2P50120 134 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 HNRNPA3P51991 378 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 EMP2P54851 167 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 CDC42P60953 191 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 CXCR4P61073 352 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 MRPS22P82650 360 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 TFAMQ00059 246 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 ZNF763Q0D2J5 394 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 PJVKQ0ZLH3 352 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 VGLL4Q14135 290 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 TFDP2Q14188 446 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 RCAN2Q14206 197 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 OXA1LQ15070 435 aa2.41□□□□□ -2.02
HERPUD1-212ENST00000567944 MPPED2Q15777 294 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms