RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 DEGS1O15121 323 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 NRASP01111 189 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 GABRA4P48169 554 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 TIGITQ495A1 244 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 LDLRAD3Q86YD5 345 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR13H1Q8NG92 308 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 NRTNQ99748 197 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 TPPP3Q9BW30 176 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 IL21Q9HBE4 155 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 KCNIP2Q9NS61 270 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 DNAJB12Q9NXW2 375 aaKnown RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 CDRT15L2A8MXV6 281 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 MASP2O00187 686 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 SPRY1O43609 319 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 NKX2-2O95096 273 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 IGHV3-9P01782 118 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 MUC1P15941 1255 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 PMCHP20382 165 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 EIF1P41567 113 aaKnown RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 RPS15P62841 145 aaKnown RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 HIST1H3AP68431 136 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 FMODQ06828 376 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF77Q15935 545 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 TMEM241Q24JQ0 296 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF770Q6IQ21 691 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC25A42Q86VD7 318 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 CATSPERDQ86XM0 798 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 VN1R1Q9GZP7 353 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 TLNRD1Q9H1K6 362 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 MPPED1O15442 326 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF217O75362 1048 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 GCM2O75603 506 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 EFNB2P52799 333 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 LAMTOR1Q6IAA8 161 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 FAHD2BQ6P2I3 314 aaPredicted RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 TIPARPQ7Z3E1 657 aaKnown RBP11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR2C3Q8N628 320 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 LINC01555Q8NAE3 123 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR2AE1Q8NHA4 323 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 NTNG2Q96CW9 530 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 FAHD2AQ96GK7 314 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 NMES1Q9C002 83 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZBP1Q9H171 429 aa11.11□□□□□ -0.63
CSPG4P13-202ENST00000567704 CA3P07451 260 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 CDAP32320 146 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 ERVS71-1P61550 626 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 PKIAP61925 76 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 DHODHQ02127 395 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 ALPK2Q86TB3 2170 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 CLEC18AA5D8T8 446 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 NPIPB8E9PQR5 432 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 PTTG1IPP53801 180 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF345Q14585 488 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 PDCD1Q15116 288 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 CDKN3Q16667 212 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC25A26Q70HW3 274 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 CLEC18CQ8NCF0 446 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 PPIL1Q9Y3C6 166 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 KIF13BQ9NQT8 1826 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 AQP7O14520 342 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 PTP4A3O75365 173 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 EIF3GO75821 320 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 HLA-DQB1P01920 261 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 CD38P28907 300 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 CHRNA7P36544 502 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 C20orf196Q8IYI0 205 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR5B3Q8NH48 314 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF596Q8TC21 504 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 ALG14Q96F25 216 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 MS4A3Q96HJ5 214 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 THOC3Q96J01 351 aaKnown RBP11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR51M1Q9H341 326 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 RAB9BQ9NP90 201 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 IL17BQ9UHF5 180 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF749O43361 778 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 PLGLAQ15195 96 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 NOSIPQ9Y314 301 aaKnown RBP11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 TMED3Q9Y3Q3 217 aa11.1□□□□□ -0.63
CSPG4P13-202ENST00000567704 UBE2L5PA0A1B0GUS4 154 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 PTBP3O95758 552 aaKnown RBP11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 CEACAM5P06731 702 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 ENPP1P22413 925 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 LIMK1P53667 647 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 DLK1P80370 383 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 ZNF92Q03936 586 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 NSUN5P2Q63ZY6 315 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 TSPAN32Q96QS1 320 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 MSL2Q9HCI7 577 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 TLCD2A6NGC4 264 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 HSBP1O75506 76 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 SCRG1O75711 98 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 HPP00738 406 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 OR5AC1P0C628 307 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 TGFBR3Q03167 851 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 SLC10A1Q14973 349 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 C6orf201Q7Z4U5 140 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 SHDQ96IW2 340 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 MOGAT1Q96PD6 335 aa11.09□□□□□ -0.63
CSPG4P13-202ENST00000567704 AQP7P3A6NL99 342 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms