RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 MRPL55Q7Z7F7 128 aaKnown RBP2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 KIF2BQ8N4N8 673 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 CDRT4Q8N9R6 151 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 GPR26Q8NDV2 337 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 OR51F2Q8NH61 342 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 OR51E1Q8TCB6 317 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 GTF2H4Q92759 462 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 RNF170Q96K19 258 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 C18orf15Q96N68 181 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 NDEL1Q9GZM8 345 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 ANKHQ9HCJ1 492 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 OR2S2Q9NQN1 319 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 ZC4H2Q9NQZ6 224 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 UNC13AQ9UPW8 1703 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 SHANK1Q9Y566 2161 aa2.44□□□□□ -2.02
SHCBP1-206ENST00000567698 IGKV1-27A0A075B6S5 117 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 SMIM26A0A096LP01 95 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 RNASEK-C17orf49H0YIS7 233 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 GABRPO00591 440 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 TOR1AO14656 332 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 ITGB1BP1O14713 200 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 XRCC2O43543 280 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 HSBP1O75506 76 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 ZMPSTE24O75844 475 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 SLC22A5O76082 557 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 HBE1P02100 147 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 GP1BAP07359 652 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 PGA4P0DJD7 388 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 PGA3P0DJD8 388 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 BGNP21810 368 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 USF1P22415 310 aaPredicted RBP2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 CD70P32970 193 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 RBM34P42696 430 aaKnown RBP2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 ZNF266Q14584 549 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 TPTE2P1Q5T6R2 138 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 ADNP2Q6IQ32 1131 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 TMPRSS11AQ6ZMR5 421 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 OR2W3Q7Z3T1 314 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 SLC7A5P1Q8MH63 180 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 OR5AR1Q8NGP9 310 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 LGALS14Q8TCE9 139 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 CCDC124Q96CT7 223 aaKnown RBP2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 NAPGQ99747 312 aaPredicted RBP2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 PARD6GQ9BYG4 376 aaPredicted RBP2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 HDHD2Q9H0R4 259 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 TMEM27Q9HBJ8 222 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 MED4Q9NPJ6 270 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 RMND1Q9NWS8 449 aa2.43□□□□□ -2.02
SHCBP1-206ENST00000567698 ADCY9O60503 1353 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 IGHV3OR16-9A0A0B4J2B5 98 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 IGHV1-69DA0A0B4J2H0 117 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 IGHV7-4-1A0A0J9YVY3 117 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 A0A1W2PRF3 423 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 A0A1W2PRM7 423 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 MGAT4DA6NG13 374 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 CENPXA8MT69 81 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 NME4O00746 187 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 ERI3O43414 337 aaKnown RBP2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 CDRT1O95170 752 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 PLEKHA8P1O95397 391 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 HLA-DQB1P01920 261 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 ME2P23368 584 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 CD40LGP29965 261 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 HOXA6P31267 233 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 RFC3P40938 356 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 SERPINB8P50452 374 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 NDUFA8P51970 172 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 EMP2P54851 167 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 RBMY1FQ15415 496 aaKnown RBP2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 NDUFAF6Q330K2 333 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 CDKL4Q5MAI5 379 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 TPRG1LQ5T0D9 272 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 TMEM25Q86YD3 366 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 ZNF547Q8IVP9 402 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 DNAAF3Q8N9W5 541 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 OR10W1Q8NGF6 305 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 OR6Q1Q8NGQ2 317 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 UBA3Q8TBC4 463 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 OR8D1Q8WZ84 308 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 ANKRD7Q92527 254 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 ZNF75AQ96N20 296 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 RNF157Q96PX1 679 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 UTP23Q9BRU9 249 aaKnown RBP2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 SLIRPQ9GZT3 109 aaKnown RBP2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 SYT4Q9H2B2 425 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 WDR55Q9H6Y2 383 aaPredicted RBP2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 UCK1Q9HA47 277 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 IMP3Q9NV31 184 aaKnown RBP2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 MAT2BQ9NZL9 334 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 PUS1Q9Y606 427 aaKnown RBP eCLIP2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 SAR1BQ9Y6B6 198 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 URGCP-MRPS24S4R325 110 aa2.42□□□□□ -2.02
SHCBP1-206ENST00000567698 IGKV1D-17A0A075B6S4 117 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 C1orf232A0A0U1RR37 186 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 TSPAN11A1L157 253 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 FABP12A6NFH5 140 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 E7EWF7 191 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 F8VP50 259 aa2.41□□□□□ -2.02
SHCBP1-206ENST00000567698 M0QXV9 152 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms