RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TMA7Q9Y2S6 64 aaKnown RBP16.33■□□□□ 0.2
MSLN-207ENST00000566549 OR6C65A6NJZ3 312 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 EFSO43281 561 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 SPDEFO95238 335 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 SCRN3Q0VDG4 424 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 BEX5Q5H9J7 111 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 TMEM164Q5U3C3 297 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 C6orf201Q7Z4U5 140 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 OR2M7Q8NG81 312 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 OR5H2Q8NGV7 314 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 PHB2Q99623 299 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 C1QTNF6Q9BXI9 259 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 GPR35Q9HC97 309 aa16.32■□□□□ 0.2
MSLN-207ENST00000566549 ZNF701Q9NV72 531 aaPredicted RBP16.32■□□□□ 0.2
MSLN-207ENST00000566549 EEF1E1-BLOC1S5C9J1V9 151 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 TBPP20226 339 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 SNU13P55769 128 aaKnown RBP16.31■□□□□ 0.2
MSLN-207ENST00000566549 HOGA1Q86XE5 327 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 SKA3Q8IX90 412 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 FAM89BQ8N5H3 189 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 CSNK2A3Q8NEV1 391 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 TERB2Q8NHR7 220 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 MITD1Q8WV92 249 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 CPNE4Q96A23 557 aaPredicted RBP16.31■□□□□ 0.2
MSLN-207ENST00000566549 PECRQ9BY49 303 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 IL17BQ9UHF5 180 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 AUP1Q9Y679 476 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 TEX46H3BTG2 121 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 IL2RAP01589 272 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 ATP1B3P54709 279 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 PNLIPRP3Q17RR3 467 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 TSPO2Q5TGU0 170 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 PPP1R1CQ8WVI7 109 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 WNT5BQ9H1J7 359 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 ZNF581Q9P0T4 197 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 DOCK10Q96BY6 2186 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 KNTC1P50748 2209 aa16.31■□□□□ 0.2
MSLN-207ENST00000566549 MT-CO3P00414 261 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 MAGEA5P43359 124 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 RIPPLY1Q0D2K3 151 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 IKZF1Q13422 519 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 OR1C1Q15619 314 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 SULF2Q8IWU5 870 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 OCSTAMPQ9BR26 566 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 HDHD3Q9BSH5 251 aaPredicted RBP16.3■□□□□ 0.2
MSLN-207ENST00000566549 OR2H1Q9GZK4 316 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 ZNF703Q9H7S9 590 aaPredicted RBP16.3■□□□□ 0.2
MSLN-207ENST00000566549 RDH8Q9NYR8 311 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 GHRLQ9UBU3 117 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 KIAA1549Q9HCM3 1950 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 IGKV1-27A0A075B6S5 117 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 C13orf42A0A1B0GVH6 325 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 CYTIPO60759 359 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 ZNF250P15622 560 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 OR3A2P47893 321 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 CAMK2BQ13554 666 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 DCAF10Q5QP82 559 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 CXorf58Q96LI9 332 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 FAM173AQ9BQD7 235 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 SLC6A15Q9H2J7 730 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 C5orf66Q9H5L9 145 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 COMMD9Q9P000 198 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 ANAPC10Q9UM13 185 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 NOSIPQ9Y314 301 aaKnown RBP16.3■□□□□ 0.2
MSLN-207ENST00000566549 TIMM10BQ9Y5J6 103 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 MYO7BQ6PIF6 2116 aa16.3■□□□□ 0.2
MSLN-207ENST00000566549 OR6C6A6NF89 314 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 FOXI3A8MTJ6 420 aaPredicted RBP16.29■□□□□ 0.2
MSLN-207ENST00000566549 KCNAB3O43448 404 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 RPA2P15927 270 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 NAT1P18440 290 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 CPT2P23786 658 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 HOXD11P31277 338 aaPredicted RBP16.29■□□□□ 0.2
MSLN-207ENST00000566549 ALDH3B1P43353 468 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 GK2Q14410 553 aaPredicted RBP16.29■□□□□ 0.2
MSLN-207ENST00000566549 SLC9A3R2Q15599 337 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 FAM189A2Q15884 450 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 EHFQ9NZC4 300 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 A0A096LPE4 126 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 A0A1W2PPZ6 126 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 CD8AP01732 235 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 RRASP10301 218 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 ZNF92Q03936 586 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 PLA2G2CQ5R387 149 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 VAX1Q5SQQ9 334 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 LPCAT3Q6P1A2 487 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 OR13G1Q8NGZ3 307 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 PLEKHJ1Q9NW61 149 aa16.29■□□□□ 0.2
MSLN-207ENST00000566549 MCTS1Q9ULC4 181 aaKnown RBP16.29■□□□□ 0.2
MSLN-207ENST00000566549 C5orf51A6NDU8 294 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 MRPL33O75394 65 aaKnown RBP16.28■□□□□ 0.2
MSLN-207ENST00000566549 RSU1Q15404 277 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 C3AR1Q16581 482 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 TAF9Q16594 264 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 CCDC28AQ8IWP9 274 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 BATF2Q8N1L9 274 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 ASB13Q8WXK3 278 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 CALHM2Q9HA72 323 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 IGKV1D-8A0A087WSZ0 117 aa16.28■□□□□ 0.2
MSLN-207ENST00000566549 SERPINA5P05154 406 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms