RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CAMK2N2Q96S95 79 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 HINT2Q9BX68 163 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 PRRG3Q9BZD7 231 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 C12orf10Q9HB07 376 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 HMG20AQ9NP66 347 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 TBX21Q9UL17 535 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 ZNF257Q9Y2Q1 563 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 V9GYY9 64 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 LRRC37A3O60309 1634 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 JCADQ9P266 1359 aa3.25□□□□□ -1.89
CNOT1-209ENST00000566240 PEAK1Q9H792 1746 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 MARF1Q9Y4F3 1742 aaKnown RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 LMO7Q8WWI1 1683 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 ALS2Q96Q42 1657 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 TRAV19A0A0A6YYK7 116 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 M0QX08 132 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 PTTG1O95997 202 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 THRAP10827 490 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 IGFBP3P17936 291 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 CD70P32970 193 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 DEKP35659 375 aaKnown RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 TALDO1P37837 337 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 GPR4P46093 362 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 ESRRGP62508 458 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 RPL23P62829 140 aaKnown RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 TNNC1P63316 161 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 ST3GAL4Q11206 333 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 RBMY1FQ15415 496 aaKnown RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 DEFB116Q30KQ4 102 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 CPTPQ5TA50 214 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 DUPD1Q68J44 220 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 CD300LGQ6UXG3 332 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 LINC00469Q8N7U9 141 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 COQ8AQ8NI60 647 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 GLT1D1Q96MS3 346 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 TEAD3Q99594 435 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 ZNF302Q9NR11 478 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 TREX1Q9NSU2 369 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 DDX19AQ9NUU7 478 aaKnown RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 RBMX2Q9Y388 322 aaKnown RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 TSSC4Q9Y5U2 329 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 NCOA3Q9Y6Q9 1424 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 LRP4O75096 1905 aa3.24□□□□□ -1.89
CNOT1-209ENST00000566240 TRPM3Q9HCF6 1732 aaPredicted RBP3.24□□□□□ -1.89
CNOT1-209ENST00000566240 IGLV4-69A0A075B6H9 119 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 RAB19A4D1S5 217 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 E7EWF7 191 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 YKT6O15498 198 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 GCM2O75603 506 aaPredicted RBP3.23□□□□□ -1.89
CNOT1-209ENST00000566240 REM1O75628 298 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 VAPBO95292 243 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 PTHP01270 115 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 RHOCP08134 193 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 PPOXP50336 477 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 HCCSP53701 268 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 TAS2R60P59551 318 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 MECOMQ03112 1051 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 UBE2SQ16763 222 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 NDUFAF6Q330K2 333 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 FBXW9Q5XUX1 488 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 RBM45Q8IUH3 476 aaKnown RBP3.23□□□□□ -1.89
CNOT1-209ENST00000566240 ITPRIPQ8IWB1 547 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 SLC30A8Q8IWU4 369 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 SYS1Q8N2H4 156 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 OR10Z1Q8NGY1 313 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 OR6N2Q8NGY6 317 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 OR51A7Q8NH64 312 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 PDXPQ96GD0 296 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 GABRG3Q99928 467 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 TMEM243Q9BU79 118 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 SAMD10Q9BYL1 202 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 SLC17A9Q9BYT1 436 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 RAB1BQ9H0U4 201 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 SYT4Q9H2B2 425 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 ZNF442Q9H7R0 627 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 VCX3AQ9NNX9 186 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 STMN3Q9NZ72 180 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 ZNF222Q9UK12 451 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 SLIT3O75094 1523 aa3.23□□□□□ -1.89
CNOT1-209ENST00000566240 MED1Q15648 1581 aaPredicted RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 OVOS2A0A0G2JMS6 1433 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 A0A0U1RQV1 116 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 LINC00854A0A1B0GVQ3 168 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 ANKRD20A5PA0PJZ0 165 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 GOLGA8JA6NMD2 632 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 LINC01619G3V211 115 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 H7C2Y5 167 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 PRMT5O14744 637 aaPredicted RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 RNF113AO15541 343 aaKnown RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 SLC22A5O76082 557 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 YIF1AO95070 293 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 SMC2O95347 1197 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 GOLGA8HP0CJ92 632 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 CCL2P13500 99 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 POLR2IP36954 125 aaKnown RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 UCNP55089 124 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 GFERP55789 205 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 RPL31P62899 125 aaKnown RBP3.22□□□□□ -1.89
CNOT1-209ENST00000566240 CRADDP78560 199 aa3.22□□□□□ -1.89
CNOT1-209ENST00000566240 KDSRQ06136 332 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms