RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 AWAT2Q6E213 333 aa16.04■□□□□ 0.16
COMMD4-213ENST00000565834 ADAM5Q6NVV9 412 aa16.04■□□□□ 0.16
COMMD4-213ENST00000565834 OR8G5Q8NG78 346 aa16.04■□□□□ 0.16
COMMD4-213ENST00000565834 HPSE2Q8WWQ2 592 aa16.04■□□□□ 0.16
COMMD4-213ENST00000565834 DVL3Q92997 716 aaPredicted RBP16.04■□□□□ 0.16
COMMD4-213ENST00000565834 POU2F3Q9UKI9 436 aa16.04■□□□□ 0.16
COMMD4-213ENST00000565834 MRPS28Q9Y2Q9 187 aaKnown RBP16.04■□□□□ 0.16
COMMD4-213ENST00000565834 ATP23Q9Y6H3 246 aa16.04■□□□□ 0.16
COMMD4-213ENST00000565834 FAM25AB3EWG3 89 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 FAM25CB3EWG5 89 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 FAM25GB3EWG6 89 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 CLDN25C9JDP6 229 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 CD3EP07766 207 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 INHBBP09529 407 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 KLF3P57682 345 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-213ENST00000565834 MSMPQ1L6U9 139 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 C2orf76Q3KRA6 126 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 BEX5Q5H9J7 111 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 UBE2NLQ5JXB2 153 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 CRIP3Q6Q6R5 217 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 CCDC190Q86UF4 302 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 LRRC28Q86X40 367 aaPredicted RBP16.03■□□□□ 0.16
COMMD4-213ENST00000565834 ANGPTL5Q86XS5 388 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 OR5A2Q8NGI9 324 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 OR5P3Q8WZ94 311 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 ITPKCQ96DU7 683 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 DIRAS2Q96HU8 199 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 CA10Q9NS85 328 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 DUSP13Q9UII6 198 aa16.03■□□□□ 0.16
COMMD4-213ENST00000565834 IGKV1-27A0A075B6S5 117 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 BPNT1O95861 308 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 APOA1P02647 267 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 ELK1P19419 428 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 SELENOVP59797 346 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 MFSD4AQ8N468 514 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 OR5D18Q8NGL1 313 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 OR8S1Q8NH09 359 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 TNFAIP8L1Q8WVP5 186 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 CMTM3Q96MX0 182 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 ADAT1Q9BUB4 502 aaKnown RBP16.02■□□□□ 0.16
COMMD4-213ENST00000565834 WDR12Q9GZL7 423 aaKnown RBP16.02■□□□□ 0.16
COMMD4-213ENST00000565834 KCNK15Q9H427 330 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 TMEM100Q9NV29 134 aa16.02■□□□□ 0.16
COMMD4-213ENST00000565834 FLNCQ14315 2725 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 PQLC2LA1A4F0 135 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 IGHV3-13P01766 116 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 EIF4EP06730 217 aaKnown RBP16.02■□□□□ 0.15
COMMD4-213ENST00000565834 ETV6P41212 452 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 PTGFRP43088 359 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 MMP15P51511 669 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 GPM6AP51674 278 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 ZNF846Q147U1 533 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 CNIH2Q6PI25 160 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 GLIPR1L1Q6UWM5 242 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 LRP11Q86VZ4 500 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 RNF170Q96K19 258 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 FGF23Q9GZV9 251 aaPredicted RBP16.02■□□□□ 0.15
COMMD4-213ENST00000565834 SLC22A4Q9H015 551 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 ZNF442Q9H7R0 627 aa16.02■□□□□ 0.15
COMMD4-213ENST00000565834 NOP16Q9Y3C1 178 aaKnown RBP16.02■□□□□ 0.15
COMMD4-213ENST00000565834 ICE1Q9Y2F5 2266 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 IGLV3-9A0A075B6K5 115 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 TMEM272A0A1B0GTI8 110 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 OR5B21A6NL26 309 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 ZNF732B4DXR9 585 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 EVX1P49640 407 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 ART1P52961 327 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 ZP1P60852 638 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 OR8G1Q15617 311 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 MRPL24Q96A35 216 aaKnown RBP16.01■□□□□ 0.15
COMMD4-213ENST00000565834 SLC25A38Q96DW6 304 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 S100A13Q99584 98 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 MICU1Q9BPX6 476 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 SYT3Q9BQG1 590 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 RTL8AQ9BWD3 113 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 RHBDL2Q9NX52 303 aa16.01■□□□□ 0.15
COMMD4-213ENST00000565834 RALYQ9UKM9 306 aaKnown RBP16.01■□□□□ 0.15
COMMD4-213ENST00000565834 ROS1P08922 2347 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 SHISA9B4DS77 424 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 UBBP0CG47 229 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 TALDO1P37837 337 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 KIR2DL3P43628 341 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 GNG3P63215 75 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 ZNF45Q02386 682 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 DMRTC2Q8IXT2 367 aaPredicted RBP16■□□□□ 0.15
COMMD4-213ENST00000565834 MRPL37Q9BZE1 423 aaKnown RBP16■□□□□ 0.15
COMMD4-213ENST00000565834 CYSLTR2Q9NS75 346 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 EXTL2Q9UBQ6 330 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 ING4Q9UNL4 249 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 RNF115Q9Y4L5 304 aa16■□□□□ 0.15
COMMD4-213ENST00000565834 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-213ENST00000565834 VSTM5A8MXK1 200 aa15.99■□□□□ 0.15
COMMD4-213ENST00000565834 PYCARD-AS1I3L0S3 204 aa15.99■□□□□ 0.15
COMMD4-213ENST00000565834 LDLRAD4O15165 306 aa15.99■□□□□ 0.15
COMMD4-213ENST00000565834 SIAH2O43255 324 aa15.99■□□□□ 0.15
COMMD4-213ENST00000565834 PLATP00750 562 aa15.99■□□□□ 0.15
COMMD4-213ENST00000565834 TMEM225BP0DP42 221 aa15.99■□□□□ 0.15
COMMD4-213ENST00000565834 NAT2P11245 290 aa15.99■□□□□ 0.15
COMMD4-213ENST00000565834 ALDH3B1P43353 468 aa15.99■□□□□ 0.15
COMMD4-213ENST00000565834 PLA2G7Q13093 441 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms