RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 C19orf18Q8NEA5 215 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 RERGQ96A58 199 aaPredicted RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 NAP1L5Q96NT1 182 aaPredicted RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 OR4K3Q96R72 315 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 UQCC2Q9BRT2 126 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 VPS37BQ9H9H4 285 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 TAS2R5Q9NYW4 299 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 CROCC2H7BZ55 1655 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 IQGAP3Q86VI3 1631 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 COL22A1Q8NFW1 1626 aaPredicted RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 ADGRB1O14514 1584 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 CPDO75976 1380 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 UBN2Q6ZU65 1347 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 H7C0C1 242 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 CD160O95971 181 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 HBE1P02100 147 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 IGLV7-43P04211 117 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 TCP1P17987 556 aaKnown RBP1.76□□□□□ -2.13
PALB2-203ENST00000565038 RAB4AP20338 218 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 HTR1DP28221 377 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 GGT2P36268 569 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 ATP5OP48047 213 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 TAS2R43P59537 309 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 C1QTNF8P60827 252 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 IHHQ14623 411 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 DEFB134Q4QY38 66 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 ARMC12Q5T9G4 340 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 HCP5Q6MZN7 132 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 CD300LGQ6UXG3 332 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 BBS5Q8N3I7 341 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 TTC29Q8NA56 475 aaPredicted RBP1.76□□□□□ -2.13
PALB2-203ENST00000565038 OR1L1Q8NH94 360 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 FAM81AQ8TBF8 368 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 PRRC1Q96M27 445 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 KCNS3Q9BQ31 491 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 HES2Q9Y543 173 aa1.76□□□□□ -2.13
PALB2-203ENST00000565038 XRN1Q8IZH2 1706 aaKnown RBP1.76□□□□□ -2.13
PALB2-203ENST00000565038 FBN1P35555 2871 aaKnown RBP1.76□□□□□ -2.13
PALB2-203ENST00000565038 CEP350Q5VT06 3117 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 CPSF1Q10570 1443 aaKnown RBP1.75□□□□□ -2.13
PALB2-203ENST00000565038 ANKARQ7Z5J8 1434 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 SDK2Q58EX2 2172 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 M0R3G1 203 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 OR7C2O60412 319 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 RAD1O60671 282 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 CCNB2O95067 398 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 FGFR1OPO95684 399 aaKnown RBP1.75□□□□□ -2.13
PALB2-203ENST00000565038 ZNF35P13682 527 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 HRES1P13985 223 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 PFN2P35080 140 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 MRPL19P49406 292 aaKnown RBP1.75□□□□□ -2.13
PALB2-203ENST00000565038 CARD17Q5XLA6 110 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 LRRC66Q68CR7 880 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 HORMAD1Q86X24 394 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 UBAC2Q8NBM4 344 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 SGTBQ96EQ0 304 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 XPO6Q96QU8 1125 aaKnown RBP1.75□□□□□ -2.13
PALB2-203ENST00000565038 UCK2Q9BZX2 261 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 ZYG11BQ9C0D3 744 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 SLC7A5P2Q9GIP4 190 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 TOLLIPQ9H0E2 274 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 USP32Q8NFA0 1604 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 DLC1Q96QB1 1528 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 ATP7BP35670 1465 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 CD163L1Q9NR16 1453 aa1.75□□□□□ -2.13
PALB2-203ENST00000565038 RGPD8O14715 1765 aaPredicted RBP1.75□□□□□ -2.13
PALB2-203ENST00000565038 DISP2A7MBM2 1401 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 CRB1P82279 1406 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 NALCNQ8IZF0 1738 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 A0A1W2PP64 1363 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 ROCK2O75116 1388 aaKnown RBP1.74□□□□□ -2.13
PALB2-203ENST00000565038 NSD2O96028 1365 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 NINLQ9Y2I6 1382 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 SHPRHQ149N8 1683 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 NHSL1Q5SYE7 1610 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 TTC21AQ8NDW8 1320 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 CDC42BPGQ6DT37 1551 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 A0A075B6Q4 140 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 ZNF878C9JN71 531 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 M0R1X1 148 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 DNAJB6O75190 326 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 IGLV2-8P01709 118 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 CLTAP09496 248 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 OTX1P32242 354 aaPredicted RBP1.74□□□□□ -2.13
PALB2-203ENST00000565038 IFITM3Q01628 133 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 ILKQ13418 452 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 SPESP1Q6UW49 350 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 CENPQQ7L2Z9 268 aaPredicted RBP1.74□□□□□ -2.13
PALB2-203ENST00000565038 DAZ4Q86SG3 579 aaKnown RBP1.74□□□□□ -2.13
PALB2-203ENST00000565038 DRAM1Q8N682 238 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 BPIFCQ8NFQ6 507 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 CCDC148Q8NFR7 591 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 CDS1Q92903 461 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 RPEQ96AT9 228 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 PANX1Q96RD7 426 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 ZNF160Q9HCG1 818 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 DAZ1Q9NQZ3 744 aaKnown RBP1.74□□□□□ -2.13
PALB2-203ENST00000565038 DYRK4Q9NR20 520 aa1.74□□□□□ -2.13
PALB2-203ENST00000565038 CLN6Q9NWW5 311 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms