RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 KCTD8Q6ZWB6 473 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 C11orf53Q8IXP5 236 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 ZDHHC23Q8IYP9 409 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 GATAD2BQ8WXI9 593 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 PKP2Q99959 881 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 RBM4BQ9BQ04 359 aaKnown RBP15.28■□□□□ 0.04
CLN6-204ENST00000564752 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 PBOV1Q9GZY1 135 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 SIRPDQ9H106 197 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 TLNRD1Q9H1K6 362 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 BEX1Q9HBH7 125 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 ADGRL4Q9HBW9 690 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 TGP01266 2768 aa15.28■□□□□ 0.04
CLN6-204ENST00000564752 ZNF816-ZNF321PA0A0X1KG74 233 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 TMEM210A6NLX4 147 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 DVL1O14640 695 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 CDIPTO14735 213 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 ECDO95905 644 aaPredicted RBP15.27■□□□□ 0.04
CLN6-204ENST00000564752 CRYBA1P05813 215 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 MAP2K3P46734 347 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 ACTR3P61158 418 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 RELBQ01201 579 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 MFGE8Q08431 387 aaPredicted RBP15.27■□□□□ 0.04
CLN6-204ENST00000564752 POU4F2Q12837 409 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 PDCD1Q15116 288 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 MICBQ29980 383 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 BTN2A1Q7KYR7 527 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 OR51G2Q8NGK0 314 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 OR4F5Q8NH21 305 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 OR5P3Q8WZ94 311 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 OSBPL10Q9BXB5 764 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 MOB1AQ9H8S9 216 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 CLN6Q9NWW5 311 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 C1RLQ9NZP8 487 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 NUFIP1Q9UHK0 495 aaKnown RBP15.27■□□□□ 0.04
CLN6-204ENST00000564752 GTF2A1LQ9UNN4 478 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 POMT1Q9Y6A1 747 aa15.27■□□□□ 0.04
CLN6-204ENST00000564752 IGHV1-69DA0A0B4J2H0 117 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 LOC110117498-PIK3R3F6TDL0 507 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 NDUFA7O95182 113 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 KNG1P01042 644 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 IGHV1-69P01742 117 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 MUC1P15941 1255 aaPredicted RBP15.26■□□□□ 0.03
CLN6-204ENST00000564752 POLR2IP36954 125 aaKnown RBP15.26■□□□□ 0.03
CLN6-204ENST00000564752 RAG2P55895 527 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 ARF6P62330 175 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 KPNB1Q14974 876 aaKnown RBP15.26■□□□□ 0.03
CLN6-204ENST00000564752 THAP5Q7Z6K1 395 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 KIR3DL3Q8N743 410 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 OR51E1Q8TCB6 317 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 SSMEM1Q8WWF3 244 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 HPSE2Q8WWQ2 592 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 RNF170Q96K19 258 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 HIST1H2AAQ96QV6 131 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 GPR84Q9NQS5 396 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 ACOXLQ9NUZ1 547 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 HAO2Q9NYQ3 351 aa15.26■□□□□ 0.03
CLN6-204ENST00000564752 WARS2Q9UGM6 360 aaKnown RBP15.26■□□□□ 0.03
CLN6-204ENST00000564752 ATP6V1B1P15313 513 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 EGR3Q06889 387 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 SRSF4Q08170 494 aaKnown RBP15.25■□□□□ 0.03
CLN6-204ENST00000564752 BCL2L15Q5TBC7 163 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 OLFML2AQ68BL7 652 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 ZFP1Q6P2D0 407 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 OR8J1Q8NGP2 316 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 WFDC12Q8WWY7 111 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 RPL3LQ92901 407 aaKnown RBP15.25■□□□□ 0.03
CLN6-204ENST00000564752 LHX4Q969G2 390 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 ITFG2Q969R8 447 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 APOL4Q9BPW4 351 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 CNTD2Q9H8S5 307 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 ORC6Q9Y5N6 252 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 R4GMQ9 66 aa15.25■□□□□ 0.03
CLN6-204ENST00000564752 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.24■□□□□ 0.03
CLN6-204ENST00000564752 MAGEB4O15481 346 aaPredicted RBP15.24■□□□□ 0.03
CLN6-204ENST00000564752 IGLV3-1P01715 115 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 TTRP02766 147 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 HTR1FP30939 366 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 GPM6AP51674 278 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 CDC42P60953 191 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 GMFBP60983 142 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 RPL15P61313 204 aaKnown RBP15.24■□□□□ 0.03
CLN6-204ENST00000564752 RIPPLY1Q0D2K3 151 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 PDLIM3Q53GG5 364 aaPredicted RBP15.24■□□□□ 0.03
CLN6-204ENST00000564752 WDR38Q5JTN6 314 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 CEP78Q5JTW2 689 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 PLEKHG7Q6ZR37 379 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 C17orf107Q6ZR85 190 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 SCCPDHQ8NBX0 429 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 OR10Z1Q8NGY1 313 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 TBC1D15Q8TC07 691 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 ST8SIA4Q92187 359 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 C12orf43Q96C57 262 aaKnown RBP15.24■□□□□ 0.03
CLN6-204ENST00000564752 TBX5Q99593 518 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 CCL13Q99616 98 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 FGF23Q9GZV9 251 aaPredicted RBP15.24■□□□□ 0.03
CLN6-204ENST00000564752 DNAJB11Q9UBS4 358 aa15.24■□□□□ 0.03
CLN6-204ENST00000564752 RPUSD1Q9UJJ7 312 aaKnown RBP15.24■□□□□ 0.03
CLN6-204ENST00000564752 A0A1B0GW55 424 aa15.23■□□□□ 0.03
CLN6-204ENST00000564752 CLPSL1A2RUU4 121 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms