RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, human

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-208	ENST00000564703	NEK6	Q9HC98	313 aa		13.46	□□□□□ -0.25
RAB40C-208	ENST00000564703	GPR173	Q9NS66	373 aa		13.46	□□□□□ -0.25
RAB40C-208	ENST00000564703	FKBP14	Q9NWM8	211 aa		13.46	□□□□□ -0.25
RAB40C-208	ENST00000564703	DCAF16	Q9NXF7	216 aa		13.46	□□□□□ -0.25
RAB40C-208	ENST00000564703	UBAP1	Q9NZ09	502 aa		13.46	□□□□□ -0.25
RAB40C-208	ENST00000564703		A0A096LNT2	108 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	CDIPT	O14735	213 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	DENR	O43583	198 aa	Known RBP	13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	RGS10	O43665	173 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZFPL1	O95159	310 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	THBS2	P35442	1172 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	MDH2	P40926	338 aa	Known RBP	13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	WNT4	P56705	351 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZNF154	Q13106	437 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	KCNJ8	Q15842	424 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	FAM76B	Q5HYJ3	339 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	RNLS	Q5VYX0	342 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	LURAP1L	Q8IV03	231 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	NANOGP1	Q8N7R0	232 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZNF671	Q8TAW3	534 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	TECTB	Q96PL2	329 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	PDCD1LG2	Q9BQ51	273 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	MND1	Q9BWT6	205 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	GSX1	Q9H4S2	264 aa	Predicted RBP	13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	ERVK-18	Q9QC07	812 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	TANC2	Q9HCD6	1990 aa		13.45	□□□□□ -0.26
RAB40C-208	ENST00000564703	CR1	P17927	2039 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	WNT9B	O14905	357 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	OGG1	O15527	345 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZNF205	O95201	554 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	IGHV2-70	P01814	119 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	TMEM155	Q4W5P6	130 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	DMRTC1	Q5HYR2	192 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	TMEM42	Q69YG0	159 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZNF826P	Q6ZT77	177 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZNF573	Q86YE8	665 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	SCCPDH	Q8NBX0	429 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	GPR148	Q8TDV2	347 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	LRRC29	Q8WV35	223 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	TSEN15	Q8WW01	171 aa	Known RBP	13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	RPL3L	Q92901	407 aa	Known RBP	13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	CDCA4	Q9BXL8	241 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	DUSP21	Q9H596	190 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZNF665	Q9H7R5	613 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	YAE1D1	Q9NRH1	226 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	DHDH	Q9UQ10	334 aa		13.44	□□□□□ -0.26
RAB40C-208	ENST00000564703	YLPM1	P49750	1951 aa	Known RBP	13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	TRAV38-1	A0A0B4J264	116 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	FAM230A	A0A1W2PPH8	454 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703		B4DSR2	109 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	CD5L	O43866	347 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	LMX1B	O60663	402 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	FSTL3	O95633	263 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	TGFA	P01135	160 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	CD2	P06729	351 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	IGHV4-31	P0DP07	118 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	PRKACB	P22694	351 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	CRHBP	P24387	322 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	CFHR2	P36980	270 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	FUT6	P51993	359 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	LMO4	P61968	165 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	SLC35A2	P78381	396 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	CDK5R1	Q15078	307 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZMYND11	Q15326	602 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	CNN3	Q15417	329 aa	Known RBP	13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	SERPINA12	Q8IW75	414 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	C11orf53	Q8IXP5	236 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	LINC01356	Q8N9X3	169 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	DEFB108B	Q8NET1	73 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	OR5D14	Q8NGL3	314 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	HPSE2	Q8WWQ2	592 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	OR51I2	Q9H344	312 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	TMEM165	Q9HC07	324 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	ZNF281	Q9Y2X9	895 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	ABCA1	O95477	2261 aa		13.43	□□□□□ -0.26
RAB40C-208	ENST00000564703	LGALS8	O00214	317 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	NDUFA2	O43678	99 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	CPT2	P23786	658 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	RBMX	P38159	391 aa	Known RBP	13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	HAAO	P46952	286 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	ATP1B3	P54709	279 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	HNRNPA0	Q13151	305 aa	Known RBP	13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	SPHAR	Q15513	63 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	MICB	Q29980	383 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	FAM201A	Q5SY85	155 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	XAF1	Q6GPH4	301 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	HAGHL	Q6PII5	290 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	WDR82	Q6UXN9	313 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703		Q71RC1	249 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	WDR86	Q86TI4	376 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	OR10Z1	Q8NGY1	313 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	OR10AC1	Q8NH08	325 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	GHSR	Q92847	366 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	SMIM19	Q96E16	107 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	ADAT3	Q96EY9	351 aa	Predicted RBP	13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	BORCS8	Q96FH0	119 aa		13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.42	□□□□□ -0.26
RAB40C-208	ENST00000564703	CHST5	Q9GZS9	411 aa		13.42	□□□□□ -0.26

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