RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 RAXQ9Y2V3 346 aa15.53■□□□□ 0.08
GDE1-203ENST00000564172 ANKRD11Q6UB99 2663 aaPredicted RBP15.52■□□□□ 0.08
GDE1-203ENST00000564172 HSPB2A8KAH6 182 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 RGS9O75916 674 aaPredicted RBP15.52■□□□□ 0.08
GDE1-203ENST00000564172 OR8U8P0C7N1 319 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 RD3LP0DJH9 198 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 PAX1P15863 534 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 ABOP16442 354 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 DDTP30046 118 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 PKIAP61925 76 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 CXADRP78310 365 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 MADCAM1Q13477 382 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 HSPB2Q16082 182 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 CYB5R2Q6BCY4 276 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 TUSC5Q8IXB3 177 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 TRMT10AQ8TBZ6 339 aaKnown RBP15.52■□□□□ 0.08
GDE1-203ENST00000564172 DTD1Q8TEA8 209 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 EXTL1Q92935 676 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 ZNF837Q96EG3 531 aaPredicted RBP15.52■□□□□ 0.08
GDE1-203ENST00000564172 PDCD1LG2Q9BQ51 273 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 PRDM14Q9GZV8 571 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 BCO1Q9HAY6 547 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 PLSCR2Q9NRY7 297 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 CHTOPQ9Y3Y2 248 aaKnown RBP15.52■□□□□ 0.08
GDE1-203ENST00000564172 LHFPL6Q9Y693 200 aa15.52■□□□□ 0.08
GDE1-203ENST00000564172 AQP7O14520 342 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 DVL2O14641 736 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 UBBP0CG47 229 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 UBCP0CG48 685 aaKnown RBP15.52■□□□□ 0.07
GDE1-203ENST00000564172 HIST1H1BP16401 226 aaKnown RBP15.52■□□□□ 0.07
GDE1-203ENST00000564172 GUCA1AP43080 201 aaPredicted RBP15.52■□□□□ 0.07
GDE1-203ENST00000564172 RPS27AP62979 156 aaKnown RBP15.52■□□□□ 0.07
GDE1-203ENST00000564172 UBA52P62987 128 aaKnown RBP15.52■□□□□ 0.07
GDE1-203ENST00000564172 FOXL2NBQ6ZUU3 175 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 MISP3Q96FF7 219 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 RHOVQ96L33 236 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 ARL6Q9H0F7 186 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 PRDM13Q9H4Q3 707 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 FRRS1LQ9P0K9 344 aa15.52■□□□□ 0.07
GDE1-203ENST00000564172 A0A1B0GTH9 108 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 NUDT19A8MXV4 375 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 AP4M1O00189 453 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 LANCL1O43813 399 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 MRPL33O75394 65 aaKnown RBP15.51■□□□□ 0.07
GDE1-203ENST00000564172 MED6O75586 246 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 RAB3DO95716 219 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 TMEM11P17152 192 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 RNPS1Q15287 305 aaKnown RBP15.51■□□□□ 0.07
GDE1-203ENST00000564172 PLEKHN1Q494U1 663 aaPredicted RBP15.51■□□□□ 0.07
GDE1-203ENST00000564172 SLC36A2Q495M3 483 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 BAIAP2L2Q6UXY1 529 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 LRRC28Q86X40 367 aaPredicted RBP15.51■□□□□ 0.07
GDE1-203ENST00000564172 GPR137CQ8N3F9 429 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 ZNF383Q8NA42 475 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 OPN3Q9H1Y3 402 aaPredicted RBP15.51■□□□□ 0.07
GDE1-203ENST00000564172 NELFAQ9H3P2 528 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 C1orf198Q9H425 327 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 POLR1DQ9Y2S0 133 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 PTPRQQ9UMZ3 2332 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 ZNF724A8MTY0 619 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 ZFPL1O95159 310 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 ZNF84P51523 738 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 TMPRSS3P57727 454 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 LSM6P62312 80 aaKnown RBP15.51■□□□□ 0.07
GDE1-203ENST00000564172 NHLH2Q02577 135 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 RPUSD3Q6P087 351 aaKnown RBP15.51■□□□□ 0.07
GDE1-203ENST00000564172 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.51■□□□□ 0.07
GDE1-203ENST00000564172 OR13C5Q8NGS8 318 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 OR2G2Q8NGZ5 317 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 RNF133Q8WVZ7 376 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 CALHM2Q9HA72 323 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 PARPBPQ9NWS1 579 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 LHX6Q9UPM6 363 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 LRP12Q9Y561 859 aa15.51■□□□□ 0.07
GDE1-203ENST00000564172 ZNHIT1O43257 154 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 GPRIN2O60269 458 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 HPXP02790 462 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 MSR1P21757 451 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 GIFP27352 417 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 RPS11P62280 158 aaKnown RBP eCLIP15.5■□□□□ 0.07
GDE1-203ENST00000564172 ACSM3Q53FZ2 586 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 RIPPLY2Q5TAB7 128 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 DEGS2Q6QHC5 323 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 RAB24Q969Q5 203 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 NABP1Q96AH0 204 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 RAB3CQ96E17 227 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 ALKBH3Q96Q83 286 aaPredicted RBP15.5■□□□□ 0.07
GDE1-203ENST00000564172 SEC11CQ9BY50 192 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 CENPMQ9NSP4 180 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 GDF2Q9UK05 429 aaPredicted RBP15.5■□□□□ 0.07
GDE1-203ENST00000564172 KCNIP3Q9Y2W7 256 aa15.5■□□□□ 0.07
GDE1-203ENST00000564172 A0A087WV48 116 aa15.49■□□□□ 0.07
GDE1-203ENST00000564172 A0A1B0GUH1 482 aa15.49■□□□□ 0.07
GDE1-203ENST00000564172 CASKO14936 926 aa15.49■□□□□ 0.07
GDE1-203ENST00000564172 UCNP55089 124 aa15.49■□□□□ 0.07
GDE1-203ENST00000564172 TSPO2Q5TGU0 170 aa15.49■□□□□ 0.07
GDE1-203ENST00000564172 FDX2Q6P4F2 183 aa15.49■□□□□ 0.07
GDE1-203ENST00000564172 LINGO2Q7L985 606 aa15.49■□□□□ 0.07
GDE1-203ENST00000564172 MCEMP1Q8IX19 187 aa15.49■□□□□ 0.07
GDE1-203ENST00000564172 TMEM185AQ8NFB2 350 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms