RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 EPHA2P29317 976 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 GPM6AP51674 278 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 ARF6P62330 175 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 CEACAM21Q3KPI0 293 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 ATPAF1Q5TC12 328 aaPredicted RBP13.94□□□□□ -0.18
CLK3-210ENST00000563112 ZBTB37Q5TC79 503 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 MOB3CQ70IA8 216 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 KRT74Q7RTS7 529 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 OR5T2Q8NGG2 359 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 OR5A2Q8NGI9 324 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 ZNF671Q8TAW3 534 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 HPSE2Q8WWQ2 592 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 GATAD2BQ8WXI9 593 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 SEH1LQ96EE3 360 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 MED30Q96HR3 178 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 DMRTB1Q96MA1 342 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 C1orf147Q96MC9 270 aaPredicted RBP13.94□□□□□ -0.18
CLK3-210ENST00000563112 TBX15Q96SF7 602 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 APOL4Q9BPW4 351 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 SEMA6AQ9H2E6 1030 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 MOB1AQ9H8S9 216 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 ADGRL4Q9HBW9 690 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 NOX4Q9NPH5 578 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 CLN6Q9NWW5 311 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 WARS2Q9UGM6 360 aaKnown RBP13.94□□□□□ -0.18
CLK3-210ENST00000563112 ENPP5Q9UJA9 477 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 PIGLQ9Y2B2 252 aa13.94□□□□□ -0.18
CLK3-210ENST00000563112 SOX21Q9Y651 276 aaPredicted RBP13.94□□□□□ -0.18
CLK3-210ENST00000563112 OR5B21A6NL26 309 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 PRR32B1ATL7 298 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 ZNF732B4DXR9 585 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 AKR7A2O43488 359 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 MMP9P14780 707 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 GLRA1P23415 457 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 TGM4P49221 684 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 EGR3Q06889 387 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 IKZF1Q13422 519 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 DEFB112Q30KQ8 113 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 CEP78Q5JTW2 689 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 BCL2L15Q5TBC7 163 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 PLCXD3Q63HM9 321 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 STUMQ69YW2 141 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 CMTM4Q8IZR5 234 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 FAM216BQ8N7L0 139 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 OR51G2Q8NGK0 314 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 LHX4Q969G2 390 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 RAB3IPQ96QF0 476 aaPredicted RBP13.93□□□□□ -0.18
CLK3-210ENST00000563112 CIB1Q99828 191 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 OSBPL10Q9BXB5 764 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 SIRPDQ9H106 197 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 WDR13Q9H1Z4 485 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 PRDM13Q9H4Q3 707 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 SNTG1Q9NSN8 517 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 KPTNQ9Y664 436 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 R4GMQ9 66 aa13.93□□□□□ -0.18
CLK3-210ENST00000563112 CENPVL3A0A0U1RRI6 287 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 MDFIC2A0A1B0GVS7 189 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 HOXA3O43365 443 aaPredicted RBP13.92□□□□□ -0.18
CLK3-210ENST00000563112 DHRS3O75911 302 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 KRT8P05787 483 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 ELF3P78545 371 aaPredicted RBP13.92□□□□□ -0.18
CLK3-210ENST00000563112 IL13RA1P78552 427 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 MFGE8Q08431 387 aaPredicted RBP13.92□□□□□ -0.18
CLK3-210ENST00000563112 CDONQ4KMG0 1287 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 RUSC1-AS1Q66K80 236 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 C16orf87Q6PH81 154 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 PPP1R14AQ96A00 147 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 TMIGD2Q96BF3 282 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 FGF23Q9GZV9 251 aaPredicted RBP13.92□□□□□ -0.18
CLK3-210ENST00000563112 OR51I2Q9H344 312 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 RIBC2Q9H4K1 309 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 ONECUT1Q9UBC0 465 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 NLKQ9UBE8 527 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 OR52A1Q9UKL2 312 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 OAZ3Q9UMX2 235 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 SNX5Q9Y5X3 404 aa13.92□□□□□ -0.18
CLK3-210ENST00000563112 IGHV1-69DA0A0B4J2H0 117 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 A0A1B0GVI7 797 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 A0A1B0GW55 424 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 FCN3O75636 299 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 NRASP01111 189 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 IGLV3-1P01715 115 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 IGHV1-69P01742 117 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 TTRP02766 147 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 DUX4L2P0CJ85 424 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 DUX4L3P0CJ86 424 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 DUX4L4P0CJ87 422 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 DUX4L5P0CJ88 424 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 DUX4L6P0CJ89 424 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 DUX4L7P0CJ90 424 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 FAHP16930 419 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 HTR1FP30939 366 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 ATP6V1E1P36543 226 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 GABRA2P47869 451 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 ZNF684Q5T5D7 378 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 DUX4L9Q6RFH8 374 aaPredicted RBP13.91□□□□□ -0.18
CLK3-210ENST00000563112 ZNF788Q6ZQV5 615 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 ELMOD2Q8IZ81 293 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 YIPF7Q8N8F6 280 aa13.91□□□□□ -0.18
CLK3-210ENST00000563112 LY6G5BQ8NDX9 201 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms