RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 SYNGR4O95473 234 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 LMO1P25800 156 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 LPAR6P43657 344 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 ACKR1Q16570 336 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 LRRC37A5PQ49AS3 106 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 ZNF658BQ4V348 819 aaPredicted RBP8.31□□□□□ -1.08
CDH1-205ENST00000562836 PAGE3Q5JUK9 113 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 FAM78BQ5VT40 261 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 PLAG1Q6DJT9 500 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 CEACAM20Q6UY09 585 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 SCD5Q86SK9 330 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 OR52E4Q8NGH9 312 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 OR4D11Q8NGI4 311 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 IL22RA2Q969J5 263 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 FGGYQ96C11 551 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 MS4A10Q96PG2 267 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 PRSS16Q9NQE7 514 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 TFCP2L1Q9NZI6 479 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 RAI2Q9Y5P3 530 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 CCDC88CQ9P219 2028 aa8.31□□□□□ -1.08
CDH1-205ENST00000562836 PLIN4Q96Q06 1357 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 SNRPGP15A8MWD9 76 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 SLC31A1O15431 190 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 ICAM1P05362 532 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 TPT1P13693 172 aaKnown RBP8.3□□□□□ -1.08
CDH1-205ENST00000562836 PMCHP20382 165 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 GABRA3P34903 492 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 PTGER1P34995 402 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 TMEM41BQ5BJD5 291 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 KCNIP4Q6PIL6 250 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 DPY19L4Q7Z388 723 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 SH3RF2Q8TEC5 729 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 ST8SIA1Q92185 356 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 DMAC2Q9NW81 257 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 UQCR10Q9UDW1 63 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 MEMO1Q9Y316 297 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 PTPRJQ12913 1337 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 RNF222A6NCQ9 220 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 THY1P04216 161 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 CTSLP07711 333 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 ADH5P11766 374 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 ACP1P24666 158 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 ZNF345Q14585 488 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 ZNF776Q68DI1 518 aaPredicted RBP8.3□□□□□ -1.08
CDH1-205ENST00000562836 TMEM251Q8N6I4 163 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 OR5W2Q8NH69 310 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 ZNF587Q96SQ5 575 aaPredicted RBP8.3□□□□□ -1.08
CDH1-205ENST00000562836 MACROD1Q9BQ69 325 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 TSSK6Q9BXA6 273 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 LRRC3Q9BY71 257 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 SERTAD4Q9NUC0 356 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 CNOT2Q9NZN8 540 aaKnown RBP8.3□□□□□ -1.08
CDH1-205ENST00000562836 ZNF581Q9P0T4 197 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 LIPGQ9Y5X9 500 aa8.3□□□□□ -1.08
CDH1-205ENST00000562836 DDX60LQ5H9U9 1706 aaKnown RBP8.3□□□□□ -1.08
CDH1-205ENST00000562836 A0A087WX48 190 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 A0A1W2PR80 420 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 B4DEV8 164 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 SLC16A7O60669 478 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 WNT2P09544 360 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 CDKN2BP42772 138 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 RPS25P62851 125 aaKnown RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 PLP2Q04941 152 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 TAF13Q15543 124 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 NCEH1Q6PIU2 408 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 ZNF429Q86V71 674 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 APOBEC3FQ8IUX4 373 aaKnown RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 TEX26Q8N6G2 289 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 OR52R1Q8NGF1 315 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 RXFP2Q8WXD0 754 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 LINC01599Q8WXQ3 324 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 APOBEC3DQ96AK3 386 aaPredicted RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 CDKN2AIPNLQ96HQ2 116 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 GPR82Q96P67 336 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 AIG1Q9NVV5 245 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 ABT1Q9ULW3 272 aaKnown RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 LSM2Q9Y333 95 aaKnown RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 ARFGEF1Q9Y6D6 1849 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 ZNF878C9JN71 531 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 OR1I1O60431 355 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 TMEM225BP0DP42 221 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 ATF1P18846 271 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 F2RP25116 425 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 ELAVL4P26378 380 aaKnown RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 PYCR1P32322 319 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 MTPNP58546 118 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 PSG9Q00887 426 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 ARHGAP1Q07960 439 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 FOXL1Q12952 345 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 COA6Q5JTJ3 125 aaKnown RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 DCUN1D4Q92564 292 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 RGMAQ96B86 450 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 KCTD12Q96CX2 325 aaKnown RBP8.29□□□□□ -1.08
CDH1-205ENST00000562836 LRTM1Q9HBL6 345 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 GP6Q9HCN6 339 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 INPP5EQ9NRR6 644 aa8.29□□□□□ -1.08
CDH1-205ENST00000562836 WSB2Q9NYS7 404 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms