RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PIGCQ92535 297 aa13.65□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 RNF170Q96K19 258 aa13.65□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 ELL3Q9HB65 397 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 ABCB9Q9NP78 766 aa13.65□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 TAS2R1Q9NYW7 299 aa13.65□□□□□ -0.22
VPS9D1-AS1-201ENST00000562298 M0R1W7 72 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 RHBDL1O75783 438 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PAHP00439 452 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 NDUFB7P17568 137 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 UBE2E1P51965 193 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GYS2P54840 703 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CAV3P56539 151 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PSMA6P60900 246 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ACSM1Q08AH1 577 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 FAM98BQ52LJ0 330 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 SLC35E4Q6ICL7 350 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 HCP5Q6MZN7 132 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PLBD1Q6P4A8 553 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ZDHHC23Q8IYP9 409 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 FAM110DQ8TAY7 271 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 C17orf50Q8WW18 174 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 MED30Q96HR3 178 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 MUC13Q9H3R2 512 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 METTL8Q9H825 291 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 NLKQ9UBE8 527 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ZNF222Q9UK12 451 aa13.64□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 IGKV1D-17A0A075B6S4 117 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 A0A1W2PQ09 198 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 OR2AT4A6NND4 320 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 B2RBV5 119 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PAICSP22234 425 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GPM6AP51674 278 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 TRIM25Q14258 630 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 C2orf68Q2NKX9 166 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 NCR3LG1Q68D85 454 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 TMEM179BQ7Z7N9 219 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ZNF454Q8N9F8 522 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ZNRF1Q8ND25 227 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 BEND2Q8NDZ0 799 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 OR5R1Q8NH85 324 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GIPC3Q8TF64 312 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 DUS3LQ96G46 650 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 AJUBAQ96IF1 538 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PPA2Q9H2U2 334 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 LRP12Q9Y561 859 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 MAB21L2Q9Y586 359 aa13.63□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ARRDC5A6NEK1 342 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ANKRD61A6NGH8 418 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PRR23D1E9PI22 279 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 H3BUX3 64 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PRR23D2P0DMB1 279 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 RAP2AP10114 183 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PSG2P11465 335 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GLRA1P23415 457 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 POU1F1P28069 291 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GABRA2P47869 451 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 MNAT1P51948 309 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GNGT1P63211 74 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GINS1Q14691 196 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 DMRTC1Q5HYR2 192 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CEP78Q5JTW2 689 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 KRT74Q7RTS7 529 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ARHGAP24Q8N264 748 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 BBS1Q8NFJ9 593 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PPP1R35Q8TAP8 253 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 OR51I2Q9H344 312 aa13.62□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PRODHO43272 600 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ATP8B1O43520 1251 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CST1P01037 141 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 SLC2A5P22732 501 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 HCCSP53701 268 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GK3PQ14409 553 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 HIST2H2BDQ6DRA6 164 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CPOQ8IVL8 374 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 RORBQ92753 470 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CHID1Q9BWS9 393 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 FBLN5Q9UBX5 448 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 SIGLEC9Q9Y336 463 aa13.61□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ZNF732B4DXR9 585 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CSF1P09603 554 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ALOX5APP20292 161 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PAX6P26367 422 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GABRA5P31644 462 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 GNG3P63215 75 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CDK5Q00535 292 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 BLMHQ13867 455 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 CEACAM21Q3KPI0 293 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 TET2Q6N021 2002 aaPredicted RBP13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 TRPM8Q7Z2W7 1104 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ADGRG5Q8IZF4 528 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 PAPD5Q8NDF8 572 aaKnown RBP13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 TMEM185AQ8NFB2 350 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 FAM81AQ8TBF8 368 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 ASB9Q96DX5 294 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 SDSLQ96GA7 329 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 NSL1Q96IY1 281 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 HIST1H2AAQ96QV6 131 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 SSX3Q99909 188 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 NIPAL2Q9H841 368 aa13.6□□□□□ -0.23
VPS9D1-AS1-201ENST00000562298 C19orf12Q9NSK7 152 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms