RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 LYZL4Q96KX0 146 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 DHRS1Q96LJ7 313 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 DDOQ99489 341 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 MICU1Q9BPX6 476 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 RTL8AQ9BWD3 113 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 FAM234AQ9H0X4 552 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 TBC1D23Q9NUY8 699 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 ARMC1Q9NVT9 282 aa9.44□□□□□ -0.9
NSMCE1-202ENST00000561960 ANXA2P2A6NMY6 339 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 HMGB1P1B2RPK0 211 aaPredicted RBP9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 CCDC159P0C7I6 412 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 PF4V1P10720 104 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 PSG2P11465 335 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 SPI1P17947 270 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 CD24P25063 80 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 GSSP48637 474 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 ZNF273Q14593 569 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 SSX2Q16385 188 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 NDUFA11Q86Y39 141 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 OR4F17Q8NGA8 305 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 OR4C15Q8NGM1 316 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 OR2T4Q8NH00 348 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 OR4Q3Q8NH05 313 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 OR5P3Q8WZ94 311 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 OR4F4Q96R69 305 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 SIKE1Q9BRV8 207 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 BTBD10Q9BSF8 475 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 ABHD6Q9BV23 337 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 TTTY10Q9BZA0 68 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 TLNRD1Q9H1K6 362 aa9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 DCAF13Q9NV06 445 aaKnown RBP9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 GAR1Q9NY12 217 aaKnown RBP9.43□□□□□ -0.9
NSMCE1-202ENST00000561960 PSMD9O00233 223 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 ARG1P05089 322 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 FMO3P31513 532 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 LGALS4P56470 323 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 PSME3P61289 254 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 KIAA2026Q5HYC2 2103 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 ATPAF1Q5TC12 328 aaPredicted RBP9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 TMEM200BQ69YZ2 307 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 C8orf82Q6P1X6 216 aaPredicted RBP9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 PRSS45Q7RTY3 260 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 ARPINQ7Z6K5 226 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 CPLX4Q7Z7G2 160 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 TIGD4Q8IY51 512 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 IQCF1Q8N6M8 205 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 CD177Q8N6Q3 437 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 OR52L1Q8NGH7 329 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 GNPDA2Q8TDQ7 276 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 C12orf43Q96C57 262 aaKnown RBP9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 MED30Q96HR3 178 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 MEGF9Q9H1U4 602 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 OR10A2Q9H208 303 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 MUC13Q9H3R2 512 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 RANBP3Q9H6Z4 567 aaPredicted RBP9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 OR14J1Q9UGF5 321 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 KLHDC2Q9Y2U9 406 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 HILPDAQ9Y5L2 63 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 CSMD3Q7Z407 3707 aa9.42□□□□□ -0.9
NSMCE1-202ENST00000561960 RFPL4AA6NLU0 287 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 ZNF732B4DXR9 585 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 RFPL4AL1F8VTS6 287 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 SELENOFO60613 162 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 TIPRLO75663 272 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 INMTO95050 263 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 PF4P02776 101 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 SEMG1P04279 462 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 H2BFMP0C1H6 154 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 DCTDP32321 178 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 VDAC2P45880 294 aaPredicted RBP9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 HCCSP53701 268 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 CAV3P56539 151 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 RPL31P62899 125 aaKnown RBP9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 EMX1Q04741 257 aaPredicted RBP9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 CD69Q07108 199 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 TSPAN31Q12999 210 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 DYNC1I2Q13409 638 aaKnown RBP9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 CNN3Q15417 329 aaKnown RBP9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 ZDHHC23Q8IYP9 409 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 C11orf42Q8N5U0 333 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 OR5D13Q8NGL4 314 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 RP9Q8TA86 221 aaKnown RBP9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 BCAS4Q8TDM0 211 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 DMRTB1Q96MA1 342 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 LYSTQ99698 3801 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 TSSK6Q9BXA6 273 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 OPA3Q9H6K4 179 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 RAB18Q9NP72 206 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 ZNF222Q9UK12 451 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 TCF19Q9Y242 345 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 CDH10Q9Y6N8 788 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 SACSQ9NZJ4 4579 aa9.41□□□□□ -0.9
NSMCE1-202ENST00000561960 A6NDX4 124 aa9.4□□□□□ -0.9
NSMCE1-202ENST00000561960 A6NIN4 97 aa9.4□□□□□ -0.9
NSMCE1-202ENST00000561960 SYNGR1O43759 233 aa9.4□□□□□ -0.9
NSMCE1-202ENST00000561960 IDH3BO43837 385 aa9.4□□□□□ -0.9
NSMCE1-202ENST00000561960 GASTP01350 101 aa9.4□□□□□ -0.9
NSMCE1-202ENST00000561960 DDOSTP39656 456 aa9.4□□□□□ -0.9
NSMCE1-202ENST00000561960 GRB2P62993 217 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms