RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 STEAP2Q8NFT2 490 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 OR56B2PQ8NGI1 322 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 OR56B4Q8NH76 319 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 CMBLQ96DG6 245 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 WBP1Q96G27 269 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 S100A13Q99584 98 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 ZMAT3Q9HA38 289 aaKnown RBP11.14□□□□□ -0.63
SNX1-211ENST00000560829 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNX1-211ENST00000560829 BSNQ9UPA5 3926 aa11.14□□□□□ -0.63
SNX1-211ENST00000560829 FAM230AA0A1W2PPH8 454 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 AKAIN1P0CW23 69 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 CBR1P16152 277 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 HIST1H1DP16402 221 aaKnown RBP11.13□□□□□ -0.63
SNX1-211ENST00000560829 MGMTP16455 207 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 ATP1B3P54709 279 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 TMEM50BP56557 158 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 TAS2R19P59542 299 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 RFPL4BQ6ZWI9 263 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 MOB3CQ70IA8 216 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 FTMTQ8N4E7 242 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 ZNF610Q8N9Z0 462 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 WDR31Q8NA23 367 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 DRAXINQ8NBI3 349 aaPredicted RBP11.13□□□□□ -0.63
SNX1-211ENST00000560829 CHST4Q8NCG5 386 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 PXT1Q8NFP0 134 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 OR5L1Q8NGL2 311 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 OR4C16Q8NGL9 310 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 OR6F1Q8NGZ6 308 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 PIGCQ92535 297 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 RNF170Q96K19 258 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 SELENOIQ9C0D9 397 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 BANF2Q9H503 90 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 OBP2BQ9NPH6 170 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 ZNF71Q9NQZ8 489 aaPredicted RBP11.13□□□□□ -0.63
SNX1-211ENST00000560829 PTTG3PQ9NZH4 202 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 IL36GQ9NZH8 169 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 ELF5Q9UKW6 265 aaPredicted RBP11.13□□□□□ -0.63
SNX1-211ENST00000560829 FREM1Q5H8C1 2179 aa11.13□□□□□ -0.63
SNX1-211ENST00000560829 SOCS1O15524 211 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 ZNF780AO75290 641 aaPredicted RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 CCNKO75909 580 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 IGKV3-15P01624 115 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 CD74P04233 296 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 H2AFB2P0C5Z0 115 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 GTF2F2P13984 249 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 RCVRNP35243 200 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 MRPL49Q13405 166 aaKnown RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 PLAC9Q5JTB6 97 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 PLCXD3Q63HM9 321 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 SFRP4Q6FHJ7 346 aaPredicted RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 BEND4Q6ZU67 534 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 RAB3CQ96E17 227 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 METTL9Q9H1A3 318 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 C20orf85Q9H1P6 137 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 POFUT1Q9H488 388 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 TRAV6A0A075B6T7 132 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 MEIS3P1A6NDR6 274 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 CD300LBA8K4G0 201 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 ZNF850A8MQ14 1090 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 MFNGO00587 321 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 NDUFB6O95139 128 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 IL2RAP01589 272 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 CD3DP04234 171 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 TMEM225BP0DP42 221 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 GNB3P16520 340 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 CPT2P23786 658 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 HOXC12P31275 282 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 CEACAM8P31997 349 aaPredicted RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 MECP2P51608 486 aaKnown RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 HLXQ14774 488 aaPredicted RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 PNLIPRP3Q17RR3 467 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 STEAP1BQ6NZ63 245 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 FBXW12Q6X9E4 464 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 FJX1Q86VR8 437 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 ZSCAN4Q8NAM6 433 aaPredicted RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 NAXEQ8NCW5 288 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 SLX1AQ9BQ83 275 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 OPN3Q9H1Y3 402 aaPredicted RBP11.12□□□□□ -0.63
SNX1-211ENST00000560829 GHITMQ9H3K2 345 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 MCUBQ9NWR8 336 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 GPR160Q9UJ42 338 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 ANAPC10Q9UM13 185 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 KCNK7Q9Y2U2 307 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 APC2O95996 2303 aa11.12□□□□□ -0.63
SNX1-211ENST00000560829 CACNA1GO43497 2377 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 PQLC2LA1A4F0 135 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 SMPD2O60906 423 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 CA11O75493 328 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 CYB5AP00167 134 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 CELA3BP08861 270 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 SERPINA2P20848 420 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 IDH3GP51553 393 aaPredicted RBP11.11□□□□□ -0.63
SNX1-211ENST00000560829 RAB25P57735 213 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 PDZK1IP1Q13113 114 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 PRDX4Q13162 271 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 ARL6IP1Q15041 203 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 CEACAM21Q3KPI0 293 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 LINC00303Q3SY05 128 aa11.11□□□□□ -0.63
SNX1-211ENST00000560829 FAAP20Q6NZ36 180 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms