RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 MKXQ8IYA7 352 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 LINC00471Q8N535 108 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 RNF148Q8N7C7 305 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 TMEM185AQ8NFB2 350 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 PROKR2Q8NFJ6 384 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 ANGPTL6Q8NI99 470 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 PIFOQ8TCI5 191 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 RPS4Y2Q8TD47 263 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 GNPDA2Q8TDQ7 276 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 SPSB4Q96A44 273 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 REEP6Q96HR9 211 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 NSMCE2Q96MF7 247 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 CDRT15Q96T59 188 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 GPR61Q9BZJ8 451 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 WNT10AQ9GZT5 417 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 TLNRD1Q9H1K6 362 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 OR52D1Q9H346 318 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 SP140LQ9H930 580 aa14.41□□□□□ -0.1
TSPAN3-208ENST00000560514 OR6C68A6NDL8 312 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 AKR7A2O43488 359 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 TFF1P04155 84 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 FABP3P05413 133 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 CFL1P23528 166 aaKnown RBP14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 COX7A1P24310 79 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 GSSP48637 474 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 KRTAP10-11P60412 298 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 FAM3AP98173 230 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 SPIBQ01892 262 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 TSPAN31Q12999 210 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 TMEM219Q86XT9 240 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 CSNK2A3Q8NEV1 391 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 OR5AU1Q8NGC0 362 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 WIPF2Q8TF74 440 aaPredicted RBP14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 RPL3LQ92901 407 aaKnown RBP14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 NLKQ9UBE8 527 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 TAGLN3Q9UI15 199 aa14.4□□□□□ -0.1
TSPAN3-208ENST00000560514 DNAH9Q9NYC9 4486 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 MEGF11A6BM72 1044 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 TVP23AA6NH52 213 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 TMEM210A6NLX4 147 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 OR2AT4A6NND4 320 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 VGLL3A8MV65 326 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 F2RL2O00254 374 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 SPARCP09486 303 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 GLRA1P23415 457 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 PYCR1P32322 319 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 SLC15A1P46059 708 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 RAB13P51153 203 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 MNAT1P51948 309 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 KLHL22Q53GT1 634 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 RPL13AP3Q6NVV1 102 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 C16orf89Q6UX73 402 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 PIGWQ7Z7B1 504 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 ZNRF1Q8ND25 227 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 SLAMF6Q96DU3 332 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 ARL2BPQ9Y2Y0 163 aa14.39□□□□□ -0.11
TSPAN3-208ENST00000560514 TCRBV4S1A1TA0A5B7 111 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 ZNF878C9JN71 531 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 H3BUI4 141 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 HSD11B1P28845 292 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 HOXD3P31249 432 aaPredicted RBP14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 CX3CR1P49238 355 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 GRB2P62993 217 aaKnown RBP14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 MXRA7P84157 204 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 CD83Q01151 205 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 GFOD2Q3B7J2 385 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 SLC35F1Q5T1Q4 408 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 CENPVQ7Z7K6 275 aaPredicted RBP14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 OR2T4Q8NH00 348 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 OR5K1Q8NHB7 308 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 FOXRED1Q96CU9 486 aaPredicted RBP14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 FAM107BQ9H098 131 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 ABCB9Q9NP78 766 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 RHBDD3Q9Y3P4 386 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 MPC1Q9Y5U8 109 aa14.38□□□□□ -0.11
TSPAN3-208ENST00000560514 A6NDX4 124 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 ARPC2O15144 300 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 DCTN3O75935 186 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 APOC1P02654 83 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 RRM2P31350 389 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 GSK3AP49840 483 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 ERVFRD-1P60508 538 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 CCDC121Q6ZUS5 278 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 SGK3Q96BR1 496 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 MUC13Q9H3R2 512 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 PPP1R3EQ9H7J1 279 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 IL20Q9NYY1 176 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 TSSC4Q9Y5U2 329 aaPredicted RBP14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 U3KQK5 164 aa14.37□□□□□ -0.11
TSPAN3-208ENST00000560514 hCG_38984A0A1B0GV85 526 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 SYNGR1O43759 233 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 NHLRC4P0CG21 123 aaPredicted RBP14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 RPL31P62899 125 aaKnown RBP14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 EGFEM1PQ0D2K5 195 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 KHDC1LQ5JSQ8 128 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 LHFPL4Q7Z7J7 247 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 ARHGAP24Q8N264 748 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 OR52H1Q8NGJ2 320 aa14.36□□□□□ -0.11
TSPAN3-208ENST00000560514 RNF170Q96K19 258 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms