RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 LOC110117498-PIK3R3F6TDL0 507 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 SELENOFO60613 162 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 GATBO75879 557 aaKnown RBP11.43□□□□□ -0.58
SMAD3-214ENST00000560402 SULT1C4O75897 302 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF12P17014 697 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 TGFBR1P36897 503 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 TGM4P49221 684 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 MTNR1BP49286 362 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 BTG1P62324 171 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 FABP5Q01469 135 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 TP53I3Q53FA7 332 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 DDI2Q5TDH0 399 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 LINC01590Q5TEZ4 76 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 KCTD18Q6PI47 426 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-214ENST00000560402 RBMS3Q6XE24 437 aaKnown RBP11.43□□□□□ -0.58
SMAD3-214ENST00000560402 ZBTB46Q86UZ6 589 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 MUC20Q8N307 709 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-214ENST00000560402 ZDHHC22Q8N966 263 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 SLC25A46Q96AG3 418 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 SMIM19Q96E16 107 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 DCLRE1CQ96SD1 692 aaKnown RBP11.43□□□□□ -0.58
SMAD3-214ENST00000560402 MRI1Q9BV20 369 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 CDADC1Q9BWV3 514 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 MARCH7Q9H992 704 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 DDX28Q9NUL7 540 aaKnown RBP11.43□□□□□ -0.58
SMAD3-214ENST00000560402 PLEK2Q9NYT0 353 aa11.43□□□□□ -0.58
SMAD3-214ENST00000560402 TRBV2A0A0J9YWF9 115 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF879B4DU55 563 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 F5H0A9 414 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-214ENST00000560402 H7C1C5 153 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 OGG1O15527 345 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 RGS5O15539 181 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 SLC16A7O60669 478 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 KHDRBS3O75525 346 aaKnown RBP11.42□□□□□ -0.58
SMAD3-214ENST00000560402 LALBAP00709 142 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF823P16415 610 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 MAPK3P27361 379 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-214ENST00000560402 RPS19P39019 145 aaKnown RBP11.42□□□□□ -0.58
SMAD3-214ENST00000560402 OR12D2P58182 307 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 LSM6P62312 80 aaKnown RBP11.42□□□□□ -0.58
SMAD3-214ENST00000560402 LCN6P62502 163 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 FOXL1Q12952 345 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 HNRNPA0Q13151 305 aaKnown RBP11.42□□□□□ -0.58
SMAD3-214ENST00000560402 CDK5R1Q15078 307 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 ESCO2Q56NI9 601 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 AWAT1Q58HT5 328 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 DMKNQ6E0U4 476 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-214ENST00000560402 SLC18B1Q6NT16 456 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 TPRA1Q86W33 373 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 OR6V1Q8N148 313 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 YIPF7Q8N8F6 280 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 DEFB108BQ8NET1 73 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 OR2Z1Q8NG97 314 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 ACOT12Q8WYK0 555 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 DVL3Q92997 716 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-214ENST00000560402 RNF167Q9H6Y7 350 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 EMC7Q9NPA0 242 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 ESM1Q9NQ30 184 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 IKZF2Q9UKS7 526 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 NUP50Q9UKX7 468 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 B9D1Q9UPM9 204 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 PPP1R3CQ9UQK1 317 aa11.42□□□□□ -0.58
SMAD3-214ENST00000560402 OR6C6A6NF89 314 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 RAC2P15153 192 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 SDC2P34741 201 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 MDH2P40926 338 aaKnown RBP11.41□□□□□ -0.58
SMAD3-214ENST00000560402 PPP5CP53041 499 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 MXD1Q05195 221 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF154Q13106 437 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 RGS21Q2M5E4 152 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 Q6ZR03 302 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 DOK3Q7L591 496 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 LRRC28Q86X40 367 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-214ENST00000560402 TIGD4Q8IY51 512 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF511Q8NB15 262 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 MINDY2Q8NBR6 621 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 OR5L1Q8NGL2 311 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 ITLN1Q8WWA0 313 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 HAVCR1Q96D42 359 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 COMMD4Q9H0A8 199 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 OR5V1Q9UGF6 321 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 AUP1Q9Y679 476 aa11.41□□□□□ -0.58
SMAD3-214ENST00000560402 PDCD5O14737 125 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 TMEM127O75204 238 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 SPARCP09486 303 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 PPIAL4GP0DN37 164 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 HKR1P10072 659 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 CTLA4P16410 223 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 ZFP36P26651 326 aaKnown RBP11.4□□□□□ -0.58
SMAD3-214ENST00000560402 SLC6A9P48067 706 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 MMP16P51512 607 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 PPP3R1P63098 170 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 DOC2BQ14184 412 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 ZNF181Q2M3W8 571 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 SPRNQ5BIV9 151 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 FBXW12Q6X9E4 464 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 CEACAM19Q7Z692 300 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 GLB1L2Q8IW92 636 aa11.4□□□□□ -0.58
SMAD3-214ENST00000560402 OTOSQ8NHW6 89 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms