RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 ZNF732B4DXR9 585 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 SPRY1O43609 319 aaPredicted RBP14.59□□□□□ -0.07
HDDC3-205ENST00000559898 IGHV1-69P01742 117 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 FAHP16930 419 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 IL5RAQ01344 420 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 AADACL4Q5VUY2 407 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 METTL11BQ5VVY1 283 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 SLX4IPQ5VYV7 408 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 C12orf73Q69YU5 71 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 FIP1L1Q6UN15 594 aaKnown RBP14.59□□□□□ -0.07
HDDC3-205ENST00000559898 ZDHHC23Q8IYP9 409 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 PNLDC1Q8NA58 520 aaKnown RBP14.59□□□□□ -0.07
HDDC3-205ENST00000559898 ANGPTL6Q8NI99 470 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 TMIGD2Q96BF3 282 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 OR51I2Q9H344 312 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 YY1AP1Q9H869 796 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 CNTD2Q9H8S5 307 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 ZMAT3Q9HA38 289 aaKnown RBP14.59□□□□□ -0.07
HDDC3-205ENST00000559898 ADGRL4Q9HBW9 690 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 TRIM36Q9NQ86 728 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 ONECUT1Q9UBC0 465 aa14.59□□□□□ -0.07
HDDC3-205ENST00000559898 ANXA2P2A6NMY6 339 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 ZAR1LA6NP61 321 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 H3BSH0 61 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 APOL3O95236 402 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 IGHV4-59P01825 116 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 TTRP02766 147 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 CXCR4P61073 352 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 ROM1Q03395 351 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 KDM4DQ6B0I6 523 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 ZNF788Q6ZQV5 615 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 MOB3CQ70IA8 216 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 MEPCEQ7L2J0 689 aaKnown RBP14.58□□□□□ -0.08
HDDC3-205ENST00000559898 OR10Z1Q8NGY1 313 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 DCTN5Q9BTE1 182 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 KRT84Q9NSB2 600 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 IKZF2Q9UKS7 526 aa14.58□□□□□ -0.08
HDDC3-205ENST00000559898 IGKV1D-17A0A075B6S4 117 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 A0A0U1RQV5 110 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 ZNF816-ZNF321PA0A0X1KG74 233 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 RNASEK-C17orf49H0YIS7 233 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 LIPFP07098 398 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 KRTAP10-3P60369 221 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 CDONQ4KMG0 1287 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 ATPAF1Q5TC12 328 aaPredicted RBP14.57□□□□□ -0.08
HDDC3-205ENST00000559898 KRT74Q7RTS7 529 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 COMMD2Q86X83 199 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 SLC35F2Q8IXU6 374 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 ZNF679Q8IYX0 411 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 KIR3DL3Q8N743 410 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 FAM81AQ8TBF8 368 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 TMEM163Q8TC26 289 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 GATAD2BQ8WXI9 593 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 H1FXQ92522 213 aaKnown RBP14.57□□□□□ -0.08
HDDC3-205ENST00000559898 CNN2Q99439 309 aaKnown RBP14.57□□□□□ -0.08
HDDC3-205ENST00000559898 TBX5Q99593 518 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 ACOXLQ9NUZ1 547 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 C1RLQ9NZP8 487 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 MRM2Q9UI43 246 aaKnown RBP14.57□□□□□ -0.08
HDDC3-205ENST00000559898 ZNF222Q9UK12 451 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 SLC22A13Q9Y226 551 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 PIGLQ9Y2B2 252 aa14.57□□□□□ -0.08
HDDC3-205ENST00000559898 A0A1B0GTI1 187 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 TMEM210A6NLX4 147 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 G3V2T6 193 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 NDUFB3O43676 98 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 SYNGR1O43759 233 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 MAP2K3P46734 347 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 CEBPDP49716 269 aaPredicted RBP14.56□□□□□ -0.08
HDDC3-205ENST00000559898 ESRRGP62508 458 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 LCN1P1Q5VSP4 162 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 KCTD18Q6PI47 426 aaPredicted RBP14.56□□□□□ -0.08
HDDC3-205ENST00000559898 ZNF322Q6U7Q0 402 aaPredicted RBP14.56□□□□□ -0.08
HDDC3-205ENST00000559898 SLC36A1Q7Z2H8 476 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 ZNRF1Q8ND25 227 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 SGMS2Q8NHU3 365 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 AQP3Q92482 292 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 CIB1Q99828 191 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 MROQ9BYG7 248 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 GABARAPL1Q9H0R8 117 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 GPR173Q9NS66 373 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 NLKQ9UBE8 527 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 NUFIP1Q9UHK0 495 aaKnown RBP14.56□□□□□ -0.08
HDDC3-205ENST00000559898 GTF2A1LQ9UNN4 478 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 MAB21L2Q9Y586 359 aa14.56□□□□□ -0.08
HDDC3-205ENST00000559898 OR2AT4A6NND4 320 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 ECDO95905 644 aaPredicted RBP14.55□□□□□ -0.08
HDDC3-205ENST00000559898 PSG2P11465 335 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 HOXB6P17509 224 aaKnown RBP14.55□□□□□ -0.08
HDDC3-205ENST00000559898 GLRA1P23415 457 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 PAX6P26367 422 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 GABRA2P47869 451 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 RIDAP52758 137 aaKnown RBP14.55□□□□□ -0.08
HDDC3-205ENST00000559898 PDCD1Q15116 288 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 ODF4Q2M2E3 257 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 CEACAM21Q3KPI0 293 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 HAGHLQ6PII5 290 aaPredicted RBP14.55□□□□□ -0.08
HDDC3-205ENST00000559898 DEGS2Q6QHC5 323 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 C17orf50Q8WW18 174 aa14.55□□□□□ -0.08
HDDC3-205ENST00000559898 DNAJC9Q8WXX5 260 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms