RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 LRP11Q86VZ4 500 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 LGALS14Q8TCE9 139 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 OR5P3Q8WZ94 311 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 FAM3DQ96BQ1 224 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 CPNE2Q96FN4 548 aaPredicted RBP10.41□□□□□ -0.74
HERC1-205ENST00000559886 WDFY2Q96P53 400 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 GPER1Q99527 375 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 FGF23Q9GZV9 251 aaPredicted RBP10.41□□□□□ -0.74
HERC1-205ENST00000559886 DUSP13Q9UII6 198 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 ATP23Q9Y6H3 246 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 A0A1B0GWJ7 208 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 PQLC2LA1A4F0 135 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 C19orf84I3L1E1 186 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 HPGDSO60760 199 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 LOXP28300 417 aaPredicted RBP10.41□□□□□ -0.74
HERC1-205ENST00000559886 TNFSF8P32971 234 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 MMP15P51511 669 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 C2orf76Q3KRA6 126 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 ANGPTL5Q86XS5 388 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 SAMD12Q8N8I0 201 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 PNLDC1Q8NA58 520 aaKnown RBP10.41□□□□□ -0.74
HERC1-205ENST00000559886 OR51D1Q8NGF3 324 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 DVL3Q92997 716 aaPredicted RBP10.41□□□□□ -0.74
HERC1-205ENST00000559886 MRPL24Q96A35 216 aaKnown RBP10.41□□□□□ -0.74
HERC1-205ENST00000559886 HIST1H2AAQ96QV6 131 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 SLC22A4Q9H015 551 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 TMEM100Q9NV29 134 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 POU2F3Q9UKI9 436 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 ETV7Q9Y603 341 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 ABCA4P78363 2273 aa10.41□□□□□ -0.74
HERC1-205ENST00000559886 INHBBP09529 407 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 RNF224P0DH78 156 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 ARSBP15848 533 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 PTGFRP43088 359 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 OR3A4PP47883 348 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 POU3F4P49335 361 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 CAPZA1P52907 286 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 ATP1B3P54709 279 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 RFT1Q96AA3 541 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 CMTM3Q96MX0 182 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 MRPL37Q9BZE1 423 aaKnown RBP10.4□□□□□ -0.74
HERC1-205ENST00000559886 MYEF2Q9P2K5 600 aaKnown RBP10.4□□□□□ -0.74
HERC1-205ENST00000559886 RNF115Q9Y4L5 304 aa10.4□□□□□ -0.74
HERC1-205ENST00000559886 LOC100289279A0A1B0GTE1 492 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 OR5B21A6NL26 309 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 NAT2P11245 290 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 ALDH3B1P43353 468 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 RANBP1P43487 201 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 GPM6AP51674 278 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 SELENOVP59797 346 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 ZP1P60852 638 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 ADIPOQQ15848 244 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 Q6ZR03 302 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 CCDC190Q86UF4 302 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 OR13G1Q8NGZ3 307 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 RNF170Q96K19 258 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 SYT3Q9BQG1 590 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 TMEM204Q9BSN7 226 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 ADAT1Q9BUB4 502 aaKnown RBP10.4□□□□□ -0.75
HERC1-205ENST00000559886 AKIP1Q9NQ31 210 aa10.4□□□□□ -0.75
HERC1-205ENST00000559886 MRPS28Q9Y2Q9 187 aaKnown RBP10.4□□□□□ -0.75
HERC1-205ENST00000559886 NOP16Q9Y3C1 178 aaKnown RBP10.4□□□□□ -0.75
HERC1-205ENST00000559886 ZNF732B4DXR9 585 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 MLNRO43193 412 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 BPNT1O95861 308 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 APOA1P02647 267 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 BMP4P12644 408 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 ELK1P19419 428 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 ETV6P41212 452 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 GNG3P63215 75 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 SRSF1Q07955 248 aaKnown RBP eCLIP10.39□□□□□ -0.75
HERC1-205ENST00000559886 AWAT2Q6E213 333 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 LRRC28Q86X40 367 aaPredicted RBP10.39□□□□□ -0.75
HERC1-205ENST00000559886 OR5D18Q8NGL1 313 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 OR8S1Q8NH09 359 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 FAM222BQ8WU58 562 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 S100ZQ8WXG8 99 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 CEP19Q96LK0 163 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 C1orf147Q96MC9 270 aaPredicted RBP10.39□□□□□ -0.75
HERC1-205ENST00000559886 E7EQL1 145 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 LDLRAD4O15165 306 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 PLAUP00749 431 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 EIF4EP06730 217 aaKnown RBP10.39□□□□□ -0.75
HERC1-205ENST00000559886 OR4A8P0C604 315 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 EVX1P49640 407 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 QRFPP83859 136 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 OR8G1Q15617 311 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 UBE2NLQ5JXB2 153 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 GLIPR1L1Q6UWM5 242 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 C1QL2Q7Z5L3 287 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 MFSD4AQ8N468 514 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 TNFAIP8L1Q8WVP5 186 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 SLC25A38Q96DW6 304 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 PIK3IP1Q96FE7 263 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 MICU1Q9BPX6 476 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 RTL8AQ9BWD3 113 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 KCNK15Q9H427 330 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 MSL2Q9HCI7 577 aa10.39□□□□□ -0.75
HERC1-205ENST00000559886 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms