RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	TMEM210	A6NLX4	147 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FAH	P16930	419 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PCMT1	P22061	227 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CCL1	P22362	96 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CPT2	P23786	658 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DCK	P27707	260 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PSMB10	P40306	273 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CEACAM21	Q3KPI0	293 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	WDR38	Q5JTN6	314 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FAM201A	Q5SY85	155 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FDX2	Q6P4F2	183 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF826P	Q6ZT77	177 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	WDR86	Q86TI4	376 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF554	Q86TJ5	538 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	GLCCI1	Q86VQ1	547 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	C11orf53	Q8IXP5	236 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	SYS1	Q8N2H4	156 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR5A2	Q8NGI9	324 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR14K1	Q8NGZ2	314 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR2G2	Q8NGZ5	317 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TMEM186	Q96B77	213 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	C4orf36	Q96KX1	117 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PTTG2	Q9NZH5	202 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CDC42EP3	Q9UKI2	254 aa		11.47	□□□□□ -0.57
CHRNB4-204	ENST00000559849	hCG_1807616	A0A1W2PRN6	198 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	IRGM	A1A4Y4	181 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	SYT7	O43581	403 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TNFAIP8	O95379	198 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	LHB	P01229	141 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	HTR1A	P08908	422 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	UBC	P0CG48	685 aa	Known RBP	11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	THBS2	P35442	1172 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	KCNJ8	Q15842	424 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF404	Q494X3	552 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	KCTD8	Q6ZWB6	473 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CCDC54	Q8NEL0	328 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RNF166	Q96A37	237 aa	Predicted RBP	11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DGCR14	Q96DF8	476 aa	Known RBP	11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PELI1	Q96FA3	418 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TMEM246	Q9BRR3	403 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF649	Q9BS31	505 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	JAM3	Q9BX67	310 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TLNRD1	Q9H1K6	362 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	HIF1AN	Q9NWT6	349 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FRRS1L	Q9P0K9	344 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MIOX	Q9UGB7	285 aa		11.46	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ANK3	Q12955	4377 aa	Known RBP	11.46	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TRAV20	A0A0B4J274	112 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CEACAM18	A8MTB9	384 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CDIPT	O14735	213 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PLPP2	O43688	288 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	NRAS	P01111	189 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ZNF12	P17014	697 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CFHR2	P36980	270 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CCR9	P51686	369 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CHRFAM7A	Q494W8	412 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CEP78	Q5JTW2	689 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CLVS2	Q5SYC1	327 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TMEM244	Q5VVB8	128 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	WDR82	Q6UXN9	313 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	MOB3C	Q70IA8	216 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GCSAM	Q8N6F7	178 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	HPSE2	Q8WWQ2	592 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	BEX2	Q9BXY8	128 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SHARPIN	Q9H0F6	387 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ISG20L2	Q9H9L3	353 aa	Known RBP	11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TRIM36	Q9NQ86	728 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LPAR3	Q9UBY5	353 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	FOXH1	O75593	365 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ISG15	P05161	165 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	WNT2	P09544	360 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	KIR3DL2	P43630	455 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GPM6A	P51674	278 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	NANOS3	P60323	173 aa	Known RBP	11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	GNG3	P63215	75 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	MRPL28	Q13084	256 aa	Known RBP	11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CR1L	Q2VPA4	569 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TMEM42	Q69YG0	159 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	BOLL	Q8N9W6	283 aa	Known RBP	11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	DEFB108B	Q8NET1	73 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	HAVCR2	Q8TDQ0	301 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PLEKHA1	Q9HB21	404 aa		11.45	□□□□□ -0.58
CHRNB4-204	ENST00000559849	TRAV38-1	A0A0B4J264	116 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	OR5B21	A6NL26	309 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	ZNF732	B4DXR9	585 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LGALS8	O00214	317 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	NDUFA2	O43678	99 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LIMS3	P0CW19	117 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LIMS4	P0CW20	117 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	HNF1A	P20823	631 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	CSNK2B	P67870	215 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	FAM120AOS	Q5T036	256 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	PLCXD3	Q63HM9	321 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	DCDC5	Q6ZRR9	648 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	RDH10	Q8IZV5	341 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	SCCPDH	Q8NBX0	429 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	C19orf18	Q8NEA5	215 aa		11.44	□□□□□ -0.58
CHRNB4-204	ENST00000559849	LRRC29	Q8WV35	223 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms