RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PMELP40967 661 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 SOX2P48431 317 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 GNG3P63215 75 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 UBE2V2Q15819 145 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 DMRTC1Q5HYR2 192 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 PARP16Q8N5Y8 322 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 OR5A2Q8NGI9 324 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 CCL17Q92583 94 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 FCGR1BQ92637 280 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 UFD1Q92890 307 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 MGLLQ99685 303 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 BPESC1Q9GZL8 116 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 FN3KRPQ9HA64 309 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 UFSP2Q9NUQ7 469 aa18.29■□□□□ 0.52
SNX1-206ENST00000559389 PQLC2LA1A4F0 135 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 TRIM64BA6NI03 449 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 A6NLC8 198 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 SLC25A16P16260 332 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 NR4A2P43354 598 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 GPM6AP51674 278 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 GPR50Q13585 617 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 TPBGQ13641 420 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 FAM76BQ5HYJ3 339 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 UBE2UQ5VVX9 321 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 ZNF696Q9H7X3 374 aa18.28■□□□□ 0.52
SNX1-206ENST00000559389 A0A096LNT2 108 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 IGKV1-9A0A0C4DH69 117 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 LRP5LA4QPB2 252 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 ZNF732B4DXR9 585 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 SERPINA3P01011 423 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 CD2P06729 351 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 OCM2P0CE71 109 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 RBMXP38159 391 aaKnown RBP18.27■□□□□ 0.52
SNX1-206ENST00000559389 GPR6P46095 362 aaPredicted RBP18.27■□□□□ 0.52
SNX1-206ENST00000559389 TMEM33P57088 247 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 CNN3Q15417 329 aaKnown RBP18.27■□□□□ 0.52
SNX1-206ENST00000559389 Q499Y3 187 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 ASPHD2Q6ICH7 369 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 KCTD8Q6ZWB6 473 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 OR13C9Q8NGT0 318 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 OR11L1Q8NGX0 322 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 HPS1Q92902 700 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 TMEM106AQ96A25 262 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 C1orf123Q9NWV4 160 aa18.27■□□□□ 0.52
SNX1-206ENST00000559389 DYSFO75923 2080 aa18.27■□□□□ 0.51
SNX1-206ENST00000559389 CSMD1Q96PZ7 3565 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 TMEM178BH3BS89 294 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 CPEP16870 476 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 ATF1P18846 271 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 LIPKQ5VXJ0 399 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 C11orf53Q8IXP5 236 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 NPRL2Q8WTW4 380 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 OR14A2Q96R54 314 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 OR51I2Q9H344 312 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 ZCCHC4Q9H5U6 513 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 SLC7A11Q9UPY5 501 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 WIPI2Q9Y4P8 454 aa18.26■□□□□ 0.51
SNX1-206ENST00000559389 LRRC30A6NM36 301 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 PPIHO43447 177 aaKnown RBP18.25■□□□□ 0.51
SNX1-206ENST00000559389 CYB5R3P00387 301 aaPredicted RBP18.25■□□□□ 0.51
SNX1-206ENST00000559389 AZGP1P25311 298 aaKnown RBP18.25■□□□□ 0.51
SNX1-206ENST00000559389 ZNF529Q6P280 563 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 ZNF826PQ6ZT77 177 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 SERPINA12Q8IW75 414 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 PHC2Q8IXK0 858 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 DNAAF1Q8NEP3 725 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 TRMT10AQ8TBZ6 339 aaKnown RBP18.25■□□□□ 0.51
SNX1-206ENST00000559389 THRSPQ92748 146 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 RPL3LQ92901 407 aaKnown RBP18.25■□□□□ 0.51
SNX1-206ENST00000559389 SPSB1Q96BD6 273 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 TMED9Q9BVK6 235 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 TAS2R4Q9NYW5 299 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 MYO9AB2RTY4 2548 aa18.25■□□□□ 0.51
SNX1-206ENST00000559389 TRBV5-7A0A0A0MS05 114 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 hCG_1807616A0A1W2PRN6 198 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 SULT1B1O43704 296 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 IRF2P14316 349 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 FSTP19883 344 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 SSX1Q16384 188 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 ARMCX4Q5H9R4 360 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 AVPI1Q5T686 147 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 WDR82Q6UXN9 313 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 C1orf87Q8N0U7 546 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 MS4A15Q8N5U1 240 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 SCCPDHQ8NBX0 429 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 TSPAN14Q8NG11 270 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 OR5D14Q8NGL3 314 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 TIMD4Q96H15 378 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 DERL3Q96Q80 235 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 NR1H4Q96RI1 486 aaPredicted RBP18.24■□□□□ 0.51
SNX1-206ENST00000559389 REG4Q9BYZ8 158 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 RNF7Q9UBF6 113 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 NPTNQ9Y639 398 aa18.24■□□□□ 0.51
SNX1-206ENST00000559389 IGKV1-27A0A075B6S5 117 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 FAM230AA0A1W2PPH8 454 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 ZNF879B4DU55 563 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 RNF223E7ERA6 249 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 CDIPTO14735 213 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 SC5DO75845 299 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 ALX3O95076 343 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms