RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 LINC00523Q86TU6 105 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 RAB43Q86YS6 212 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 SGPP2Q8IWX5 399 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 STK40Q8N2I9 435 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 KIF2BQ8N4N8 673 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 TRAM1L1Q8N609 369 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 PHOSPHO2Q8TCD6 241 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 RXFP4Q8TDU9 374 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 ASZ1Q8WWH4 475 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 CPNE4Q96A23 557 aaPredicted RBP1.44□□□□□ -2.18
VPS13C-207ENST00000558919 ISOC2Q96AB3 205 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 KIAA1143Q96AT1 154 aaPredicted RBP1.44□□□□□ -2.18
VPS13C-207ENST00000558919 KCNS1Q96KK3 526 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 SCGB3A2Q96PL1 93 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 SEC22CQ9BRL7 303 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 EMC6Q9BV81 110 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 TDRD3Q9H7E2 651 aaKnown RBP1.44□□□□□ -2.18
VPS13C-207ENST00000558919 LINC00574Q9H8X3 128 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 LZTFL1Q9NQ48 299 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 TUBG2Q9NRH3 451 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 DDX19BQ9UMR2 479 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 HES2Q9Y543 173 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 TMEM131Q92545 1883 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 MROH7Q68CQ1 1323 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 NEURL4Q96JN8 1562 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 IGKV1-27A0A075B6S5 117 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 A0A0B4J2E0 115 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 C4orf51C9J302 202 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 PRAMEF26H0Y7S4 382 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 H3BN98 237 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 SPOPO43791 374 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 SERPINB7O75635 380 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 GATBO75879 557 aaKnown RBP1.43□□□□□ -2.18
VPS13C-207ENST00000558919 SNAI1O95863 264 aaPredicted RBP1.43□□□□□ -2.18
VPS13C-207ENST00000558919 CSTAP01040 98 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 PTHP01270 115 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 MBP02144 154 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 MT-ND4P03905 459 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 KLK1P06870 262 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 CCDC172P0C7W6 258 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 INAFM2P0DMQ5 153 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 HRES1P13985 223 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 TCP1P17987 556 aaKnown RBP1.43□□□□□ -2.18
VPS13C-207ENST00000558919 SRMP19623 302 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 PMCHP20382 165 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 GABRR2P28476 465 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 GGT2P36268 569 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 ATP6V0D1P61421 351 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 LCN2P80188 198 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 TNFRSF9Q07011 255 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 NAB1Q13506 487 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 STK38Q15208 465 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 OR1Q1Q15612 314 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 DEFB134Q4QY38 66 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 TBPL2Q6SJ96 375 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 CD300LGQ6UXG3 332 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 MDP1Q86V88 176 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 PDCL2Q8N4E4 241 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 ZNF645Q8N7E2 425 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 OR5T3Q8NGG3 340 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 OR1L1Q8NH94 360 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 ENKURQ8TC29 256 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 PIH1D2Q8WWB5 315 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 RERGQ96A58 199 aaPredicted RBP1.43□□□□□ -2.18
VPS13C-207ENST00000558919 ZNF707Q96C28 371 aaPredicted RBP1.43□□□□□ -2.18
VPS13C-207ENST00000558919 FAM19A4Q96LR4 140 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 GPR82Q96P67 336 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 KCNS3Q9BQ31 491 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 SIKE1Q9BRV8 207 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 XKR8Q9H6D3 395 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 HAUS4Q9H6D7 363 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 REEP1Q9H902 201 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 DYRK4Q9NR20 520 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 TAS2R1Q9NYW7 299 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 PLXNB1O43157 2135 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 SVILO95425 2214 aa1.43□□□□□ -2.18
VPS13C-207ENST00000558919 PRR14LQ5THK1 2151 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 A0A0A6YYD5 115 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 A0A1W2PRF3 423 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 A0A1W2PRM7 423 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 GOLGA8JA6NMD2 632 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 CENPXA8MT69 81 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 HACD1B0YJ81 288 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 LINC01619G3V211 115 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 NDUFS8O00217 210 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 PSPHP1O15172 72 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 TGM6O95932 706 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 TRBV12-3P01733 135 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 RPN2P04844 631 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 CRYGCP07315 174 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 GOLGA8HP0CJ92 632 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 STAG3L2P0CL84 134 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 THRAP10827 490 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 PTNP21246 168 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 CPN2P22792 545 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 APLNRP35414 380 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 CFHR2P36980 270 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 ERFP50548 548 aa1.42□□□□□ -2.18
VPS13C-207ENST00000558919 PSMD4P55036 377 aaKnown RBP1.42□□□□□ -2.18
VPS13C-207ENST00000558919 RPL18AQ02543 176 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms