RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 RAB12Q6IQ22 244 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 VWA1Q6PCB0 445 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 MYPOPQ86VE0 399 aaPredicted RBP11.18□□□□□ -0.62
SMAD3-207ENST00000558763 ZNF101Q8IZC7 436 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 OR4C16Q8NGL9 310 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 DEDD2Q8WXF8 326 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 PHF21AQ96BD5 680 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 SPSB1Q96BD6 273 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 REPIN1Q9BWE0 567 aaKnown RBP11.18□□□□□ -0.62
SMAD3-207ENST00000558763 GHITMQ9H3K2 345 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 POFUT1Q9H488 388 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 KCNK7Q9Y2U2 307 aa11.18□□□□□ -0.62
SMAD3-207ENST00000558763 TRGV8A0A0C4DH27 118 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 METTL21EPA6NDL7 271 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 TNFSF13O75888 250 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 CCNKO75909 580 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 NGFP01138 241 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 GSTT2BP0CG30 244 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 UBBP0CG47 229 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 COX5AP20674 150 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 PTGER4P35408 488 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 VEGFCP49767 419 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 RAG2P55895 527 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 TMEM50BP56557 158 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 GK2Q14410 553 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-207ENST00000558763 PLAC9Q5JTB6 97 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 SFRP4Q6FHJ7 346 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-207ENST00000558763 Q6ZT83 130 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 Q6ZTK2 550 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 NCCRP1Q6ZVX7 275 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-207ENST00000558763 MDP1Q86V88 176 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 KCNG3Q8TAE7 436 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 AKAP1Q92667 903 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMAD3-207ENST00000558763 BANF2Q9H503 90 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 A0A0A6YYJ9 748 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 MBD3L4A6NDZ8 208 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-207ENST00000558763 MBD3L3A6NE82 208 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-207ENST00000558763 MBD3L5A6NJ08 208 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-207ENST00000558763 TOXO94900 526 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 MPIG6BO95866 241 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 CSF1P09603 554 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 TLE1Q04724 770 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 GSG1Q2KHT4 349 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 SLC22A6Q4U2R8 563 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 CLVS2Q5SYC1 327 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 ATAD3CQ5T2N8 411 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 TMEM53Q6P2H8 277 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 DPPA2Q7Z7J5 298 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 CNEP1R1Q8N9A8 125 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 OR10R2Q8NGX6 335 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 MBD3L2Q8NHZ7 208 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-207ENST00000558763 GPER1Q99527 375 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 TMEM59Q9BXS4 323 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 OSGIN2Q9Y236 505 aa11.17□□□□□ -0.62
SMAD3-207ENST00000558763 A8MV72 311 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 SOCS1O15524 211 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 SSX5O60225 188 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 CNOT4O95628 575 aaKnown RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 CD3DP04234 171 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 ZNF14P17017 642 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 PSMB1P20618 241 aaKnown RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 EIF2B2P49770 351 aaKnown RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 RPS27AP62979 156 aaKnown RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 GABRA6Q16445 453 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 ZBTB37Q5TC79 503 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 OR2A2Q6IF42 318 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 CDH24Q86UP0 819 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 GABRG1Q8N1C3 465 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 PNLDC1Q8NA58 520 aaKnown RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 NAXEQ8NCW5 288 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 OR6K3Q8NGY3 331 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 TNFAIP8L1Q8WVP5 186 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 APOBEC3DQ96AK3 386 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 BOD1Q96IK1 185 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 FGF23Q9GZV9 251 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-207ENST00000558763 TAS2R8Q9NYW2 309 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 GHRLQ9UBU3 117 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 FLVCR2Q9UPI3 526 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 ZNF816-ZNF321PA0A0X1KG74 233 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 LYZL6O75951 148 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 SCGNO76038 276 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 NRASP01111 189 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 CGAP01215 116 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 FCER2P06734 321 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 CELA3BP08861 270 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 H2AFB2P0C5Z0 115 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 GLI4P10075 376 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 GNB3P16520 340 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 CCNOP22674 350 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 ACTBP60709 375 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 ACTG1P63261 375 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 IGFBP7Q16270 282 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 CDNFQ49AH0 187 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 ASCL4Q6XD76 172 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 RFPL4BQ6ZWI9 263 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 OR56B2PQ8NGI1 322 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 OR10K1Q8NGX5 313 aa11.16□□□□□ -0.62
SMAD3-207ENST00000558763 OR56B4Q8NH76 319 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms